U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100678424 uncharacterized LOC100678424 [ Nasonia vitripennis (jewel wasp) ]

Gene ID: 100678424, updated on 1-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LOC100678424
Gene description
uncharacterized LOC100678424
Gene type
protein coding
RefSeq status
MODEL
Organism
Nasonia vitripennis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
Orthologs
honey bee all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC100678424 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
104 current Nvit_psr_1.1 (GCF_009193385.2) 1 Unlocalized Scaffold NC_045757.1 (14614886..14621647, complement)
103 previous assembly Nvit_psr_1 (GCF_009193385.1) 1 Unlocalized Scaffold NW_022279592.1 (8461617..8468265)

Chromosome 1 - NC_045757.1Genomic Context describing neighboring genes Neighboring gene RING finger protein 121 Neighboring gene protein kinase C and casein kinase substrate in neurons protein Synd Neighboring gene uncharacterized LOC107980505 Neighboring gene SID1 transmembrane family member 2 Neighboring gene Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein LOC100678424

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nvit_psr_1.1

Genomic

  1. NC_045757.1 Reference Nvit_psr_1.1

    Range
    14614886..14621647 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008211048.4 → XP_008209270.1  uncharacterized protein LOC100678424 isoform X2

    UniProtKB/TrEMBL
    A0A7M7H6E9
    Conserved Domains (3) summary
    smart00868
    Location:13 → 82
    zf-AD; Zinc-finger associated domain (zf-AD)
    sd00017
    Location:1173 → 1193
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12756
    Location:1221 → 1264
    zf-C2H2_2; C2H2 type zinc-finger (2 copies)

  2. XM_008211046.4 → XP_008209268.1  uncharacterized protein LOC100678424 isoform X1

    See identical proteins and their annotated locations for XP_008209268.1

    UniProtKB/TrEMBL
    A0A7M7H6X6
    Conserved Domains (3) summary
    smart00868
    Location:13 → 82
    zf-AD; Zinc-finger associated domain (zf-AD)
    sd00017
    Location:1174 → 1194
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12756
    Location:1222 → 1265
    zf-C2H2_2; C2H2 type zinc-finger (2 copies)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials