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LOC100650682 T-box protein H15 [ Bombus terrestris (buff-tailed bumblebee) ]

Gene ID: 100650682, updated on 1-Oct-2024

Summary

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Gene symbol
LOC100650682
Gene description
T-box protein H15
See related
EnsemblRapid:ENSBTSG00005020664
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus terrestris
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Bombus
Orthologs
honey bee all
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Genomic context

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See LOC100650682 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
103 current iyBomTerr1.2 (GCF_910591885.1) 5 NC_063273.1 (5453176..5470846, complement)
102 previous assembly Bter_1.0 (GCF_000214255.1) Linkage Group LG B05 NC_015766.1 (4931655..4949604, complement)

Chromosome 5 - NC_063273.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125385086 Neighboring gene T-box transcription factor TBX20 Neighboring gene transglutaminase Neighboring gene cdc42 homolog Neighboring gene AKT-interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell fate specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-box protein H15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus terrestris Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyBomTerr1.2

Genomic

  1. NC_063273.1 Reference iyBomTerr1.2

    Range
    5453176..5470846 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012308733.3 → XP_012164123.1  T-box protein H15 isoform X1

    UniProtKB/TrEMBL
    A0A9B2MP18
    Conserved Domains (1) summary
    cd00182
    Location:250 → 443
    TBOX; T-box DNA binding domain of the T-box family of transcriptional regulators. The T-box family is an ancient group that appears to play a critical role in development in all animal species. These genes were uncovered on the basis of similarity to the DNA ...

  2. XM_012308734.3 → XP_012164124.3  T-box protein H15 isoform X2

    UniProtKB/TrEMBL
    A0A9B2MNG0
    Related
    ENSBTSP00005067519.1, ENSBTST00005066113.1
Nucleotide Protein
Heading Accession and Version

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