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Cph Chronophage [ Bombus terrestris (buff-tailed bumblebee) ]

Gene ID: 100645414, updated on 10-Oct-2024

Summary

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Gene symbol
Cph
Gene description
Chronophage
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus terrestris
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Bombus
Orthologs
fruit fly honey bee all
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Genomic context

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See Cph in Genome Data Viewer
Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
103 current iyBomTerr1.2 (GCF_910591885.1) 10 NC_063278.1 (5869718..5918591, complement)
102 previous assembly Bter_1.0 (GCF_000214255.1) Linkage Group LG B10 NC_015771.1 (5417435..5463333, complement)

Chromosome 10 - NC_063278.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110119620 Neighboring gene uncharacterized LOC105666174 Neighboring gene lethal (2) k10201 Neighboring gene transcription factor giant Neighboring gene uncharacterized LOC125385749 Neighboring gene uncharacterized LOC125385781 Neighboring gene uncharacterized LOC125385782

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Study of the Metatranscriptome of Eight Social and Solitary Wild Bee Species Reveals Novel Viruses and Bee Parasites. Schoonvaere K, et al. Front Microbiol, 2018. PMID 29491849, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
B-cell lymphoma/leukemia 11A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus terrestris Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyBomTerr1.2

Genomic

  1. NC_063278.1 Reference iyBomTerr1.2

    Range
    5869718..5918591 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012312643.3 → XP_012168033.1  B-cell lymphoma/leukemia 11A

    UniProtKB/TrEMBL
    A0A9B2MQG5
    Conserved Domains (3) summary
    sd00017
    Location:770 → 790
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:769 → 790
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:782 → 807
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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