U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GTF2A2 general transcription factor IIA subunit 2 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100584270, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
GTF2A2
Gene description
general transcription factor IIA subunit 2
See related
EnsemblRapid:ENSNLEG00000030007
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GTF2A2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 6 NC_044386.1 (78856859..78876202, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 6 NC_019821.1 (78852018..78871724, complement)

Chromosome 6 - NC_044386.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L21 pseudogene Neighboring gene glucosaminyl (N-acetyl) transferase 3, mucin type Neighboring gene phosphatidylinositol N-acetylglucosaminyltransferase subunit H pseudogene Neighboring gene BCL2 interacting protein 2 Neighboring gene ATP-dependent RNA helicase DDX18 pseudogene

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II general transcription initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables TBP-class protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA polymerase II preinitiation complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription initiation factor IIA subunit 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044386.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    78856859..78876202 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003267052.4 → XP_003267100.2  transcription initiation factor IIA subunit 2

    UniProtKB/TrEMBL
    A0A2I3HGK5
    Conserved Domains (1) summary
    COG5123
    Location:3 → 103
    TOA2; Transcription initiation factor IIA, gamma subunit [Transcription]

  2. XM_003267053.4 → XP_003267101.2  transcription initiation factor IIA subunit 2

    UniProtKB/TrEMBL
    A0A2I3HGK5
    Related
    ENSNLEP00000042596.2, ENSNLET00000047437.2
    Conserved Domains (1) summary
    COG5123
    Location:3 → 103
    TOA2; Transcription initiation factor IIA, gamma subunit [Transcription]

  3. XM_004088287.3 → XP_004088335.2  transcription initiation factor IIA subunit 2

    UniProtKB/TrEMBL
    A0A2I3HGK5
    Conserved Domains (1) summary
    COG5123
    Location:3 → 103
    TOA2; Transcription initiation factor IIA, gamma subunit [Transcription]

  4. XM_030814496.1 → XP_030670356.1  transcription initiation factor IIA subunit 2

    UniProtKB/TrEMBL
    A0A2I3HGK5
    Conserved Domains (1) summary
    COG5123
    Location:3 → 103
    TOA2; Transcription initiation factor IIA, gamma subunit [Transcription]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.