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scmh1 Scm polycomb group protein homolog 1 [ Anolis carolinensis (green anole) ]

Gene ID: 100556469, updated on 8-Mar-2024

Summary

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Gene symbol
scmh1
Gene description
Scm polycomb group protein homolog 1
See related
Ensembl:ENSACAG00000016962
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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See scmh1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) Unplaced Scaffold NW_026943821.1 (18097003..18112430, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003338973.1 (771289..785289)

NW_026943821.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134293766 Neighboring gene CTP synthase 1 Neighboring gene schlafen like 1 Neighboring gene rhomboid like 2 Neighboring gene MYC binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycomb protein SCMH1
Names
sex comb on midleg homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NW_026943821.1 Reference rAnoCar3.1.pri

    Range
    18097003..18112430 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008119908.3 → XP_008118115.2  polycomb protein SCMH1 isoform X2

  2. XM_003226911.4 → XP_003226959.2  polycomb protein SCMH1 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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