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ets1 ETS proto-oncogene 1, transcription factor [ Anolis carolinensis (green anole) ]

Gene ID: 100556201, updated on 10-Oct-2024

Summary

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Gene symbol
ets1
Gene description
ETS proto-oncogene 1, transcription factor
See related
Ensembl:ENSACAG00000016330
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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See ets1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) Unplaced Scaffold NW_026943819.1 (19695949..19832650, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003338744.1 (4553831..4682688)

NW_026943819.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134293414 Neighboring gene U1 spliceosomal RNA Neighboring gene uncharacterized LOC134293513 Neighboring gene uncharacterized LOC134293553 Neighboring gene Fli-1 proto-oncogene, ETS transcription factor Neighboring gene potassium inwardly rectifying channel subfamily J member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein C-ets-1
Names
v-ets avian erythroblastosis virus E26 oncogene homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NW_026943819.1 Reference rAnoCar3.1.pri

    Range
    19695949..19832650 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062961466.1 → XP_062817536.1  protein C-ets-1 isoform X2

  2. XM_062961465.1 → XP_062817535.1  protein C-ets-1 isoform X1

  3. XM_062961467.1 → XP_062817537.1  protein C-ets-1 isoform X3

    UniProtKB/TrEMBL
    A0A803T2E8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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