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renr Renin receptor [ Salmo salar (Atlantic salmon) ]

Gene ID: 100195062, updated on 30-Nov-2023

Summary

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Gene symbol
renr
Gene description
Renin receptor
See related
Ensembl:ENSSSAG00000007854
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See renr in Genome Data Viewer
Location:
chromosome: ssa21
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa21 NC_059462.1 (26082075..26091591, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa21 NC_027320.1 (26165842..26175350, complement)

Chromosome ssa21 - NC_059462.1Genomic Context describing neighboring genes Neighboring gene interphotoreceptor matrix proteoglycan 2 Neighboring gene SUMO specific peptidase 7 Neighboring gene BCL-6 corepressor Neighboring gene cyclic AMP receptor-like protein A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. Leong JS, et al. BMC Genomics, 2010 Apr 30. PMID 20433749, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Renin receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001140091.1 → NP_001133563.1  Renin receptor precursor

    See identical proteins and their annotated locations for NP_001133563.1

    Status: PROVISIONAL

    Source sequence(s)
    BT045222
    UniProtKB/TrEMBL
    B5X2F3
    Related
    ENSSSAP00000016666.1, ENSSSAT00000017683.2
    Conserved Domains (1) summary
    pfam07850
    Location:266 → 362
    Renin_r; Renin receptor-like protein

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059462.1 Reference Ssal_v3.1

    Range
    26082075..26091591 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials