ESRRG estrogen related receptor gamma [Pongo abelii (Sumatran orangutan)] - Gene

Summary

Gene symbol: ESRRG
Gene description: estrogen related receptor gamma
Locus tag: CR201_G0021962
See related: Ensembl:ENSPPYG00000000217
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Pongo abelii
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Also known as: ERR3; NR3B3
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2)	1	NC_071985.2 (32352352..32944725)
RS_2023_04	previous assembly	NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1)	1	NC_071985.1 (32352318..32944691)

Chromosome 1 - NC_071985.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

D1S1838E (e-PCR)
- UniSTS:18179

D1S3320 (e-PCR)
- UniSTS:51205

D1S490 (e-PCR)
- UniSTS:782

D1S2424 (e-PCR)
- UniSTS:36116

SHGC-86241 (e-PCR)
- UniSTS:104475

D1S2422 (e-PCR)
- UniSTS:48168

SHGC-147669 (e-PCR)
- UniSTS:175942

AL033895 (e-PCR)
- UniSTS:93771

ESRRG_2260 (e-PCR)
- UniSTS:280660

D12S1331 (e-PCR)
- UniSTS:16987

SHGC-79099 (e-PCR)
- UniSTS:170092

G18039 (e-PCR)
- UniSTS:28274

242XF6 (e-PCR)
- UniSTS:36219

SHGC-56916 (e-PCR)
- UniSTS:14716

AL033738 (e-PCR)
- UniSTS:93607

G20464 (e-PCR)
- UniSTS:39854

RH16932 (e-PCR)
- UniSTS:88001

SHGC-84976 (e-PCR)
- UniSTS:104902

PMC137182P10 (e-PCR)
- UniSTS:270821

PMC137182P11 (e-PCR)
- UniSTS:270822

AL034041 (e-PCR)
- UniSTS:93936

RH120145 (e-PCR)
- UniSTS:132350

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables estrogen response element binding	IEA Inferred from Electronic Annotation more info	PubMed
enables nuclear receptor activity	IEA Inferred from Electronic Annotation more info	PubMed
enables nuclear steroid receptor activity	IEA Inferred from Electronic Annotation more info	PubMed
enables steroid binding	IEA Inferred from Electronic Annotation more info	PubMed
enables zinc ion binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in nuclear receptor-mediated steroid hormone signaling pathway	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed
involved_in retinoic acid receptor signaling pathway	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of chromatin	IEA Inferred from Electronic Annotation more info	PubMed
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: estrogen-related receptor gamma

Names: estrogen receptor-related protein 3; nuclear receptor subfamily 3 group B member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001132224.1 → NP_001125696.1 estrogen-related receptor gamma

See identical proteins and their annotated locations for NP_001125696.1

Status: PROVISIONAL

Source sequence(s)

CR858993

UniProtKB/Swiss-Prot

Q5RAM2

UniProtKB/TrEMBL

A0A2J8V645

Related

ENSPPYP00000034818.1, ENSPPYT00000039911.1

Conserved Domains (2) summary

cd06946
Location:214 → 433

NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors

cd07170
Location:99 → 195

NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

NC_071985.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Range

32352352..32944725

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_063728289.1 → XP_063584359.1 estrogen-related receptor gamma isoform X2

UniProtKB/TrEMBL

A0A2J8V601
XM_063728299.1 → XP_063584369.1 estrogen-related receptor gamma isoform X2

UniProtKB/TrEMBL

A0A2J8V601
XM_063728294.1 → XP_063584364.1 estrogen-related receptor gamma isoform X2

UniProtKB/TrEMBL

A0A2J8V601
XM_009237667.4 → XP_009235942.1 estrogen-related receptor gamma isoform X1

See identical proteins and their annotated locations for XP_009235942.1

UniProtKB/TrEMBL

A0A2J8V609, H2N3Q0

Related

ENSPPYP00000000224.3

Conserved Domains (2) summary

cd06946
Location:237 → 456

NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors

cd07170
Location:122 → 218

NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers
XM_063728292.1 → XP_063584362.1 estrogen-related receptor gamma isoform X2

UniProtKB/TrEMBL

A0A2J8V601
XM_063728298.1 → XP_063584368.1 estrogen-related receptor gamma isoform X2

UniProtKB/TrEMBL

A0A2J8V601
XM_063728287.1 → XP_063584357.1 estrogen-related receptor gamma isoform X2

UniProtKB/TrEMBL

A0A2J8V601