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arxa aristaless related homeobox a [ Oryzias latipes (Japanese medaka) ]

Gene ID: 100144363, updated on 8-Mar-2024

Summary

Gene symbol
arxa
Gene description
aristaless related homeobox a
See related
EnsemblRapid:ENSORLG00000007450
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Also known as
arx
Orthologs
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Genomic context

See arxa in Genome Data Viewer
Location:
chromosome: 20
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 20 NC_019878.2 (15111322..15115962)
102 previous assembly ASM31367v1 (GCF_000313675.1) 20 NC_019878.1 (13328364..13333004)

Chromosome 20 - NC_019878.2Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit B4 Neighboring gene homogentisate 1,2-dioxygenase Neighboring gene polymerase (DNA directed), alpha 1 Neighboring gene phosphate cytidylyltransferase 1B, choline a

Genomic regions, transcripts, and products

General protein information

Preferred Names
aristaless-related homeobox protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001122913.1NP_001116385.1  aristaless-related homeobox protein

    See identical proteins and their annotated locations for NP_001116385.1

    Status: PROVISIONAL

    Source sequence(s)
    EU048547
    UniProtKB/TrEMBL
    A0A3P9L9F6, A8HG52
    Related
    ENSORLP00000029510.1, ENSORLT00000035833.2
    Conserved Domains (2) summary
    pfam00046
    Location:226278
    Homeobox; Homeobox domain
    pfam03826
    Location:428445
    OAR; OAR domain

RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019878.2 Reference ASM223467v1 Primary Assembly

    Range
    15111322..15115962
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)