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Iswi Imitation SWI [ Nasonia vitripennis (jewel wasp) ]

Gene ID: 100117522, updated on 10-Oct-2024

Summary

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Gene symbol
Iswi
Gene description
Imitation SWI
See related
NASONIABASE:NV15374
Gene type
protein coding
RefSeq status
MODEL
Organism
Nasonia vitripennis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
Orthologs
fruit fly honey bee all
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Genomic context

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See Iswi in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
104 current Nvit_psr_1.1 (GCF_009193385.2) 1 Unlocalized Scaffold NC_045757.1 (25291634..25297716)
103 previous assembly Nvit_psr_1 (GCF_009193385.1) 1 Unlocalized Scaffold NW_022279598.1 (12578012..12582805, complement)

Chromosome 1 - NC_045757.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107981895 Neighboring gene methylenetetrahydrofolate reductase Neighboring gene CUE domain-containing protein 2 Neighboring gene protein jim lovell Neighboring gene fatty acyl-CoA reductase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chromatin-remodeling complex ATPase chain Iswi

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nvit_psr_1.1

Genomic

  1. NC_045757.1 Reference Nvit_psr_1.1

    Range
    25291634..25297716
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031921045.2 → XP_031776905.1  chromatin-remodeling complex ATPase chain Iswi

    UniProtKB/TrEMBL
    A0A7M7T655
    Conserved Domains (1) summary
    PLN03142
    Location:42 → 1023
    PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
Nucleotide Protein Strain
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