U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ZBTB8B zinc finger and BTB domain containing 8B [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100078014, updated on 30-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
ZBTB8B
Gene description
zinc finger and BTB domain containing 8B
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ZBTB8B in Genome Data Viewer
Location:
chromosome: 16
Exon count:
3
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 16 NC_041743.1 (41658420..41668058)

Chromosome 16 - NC_041743.1Genomic Context describing neighboring genes Neighboring gene testis specific serine kinase 3 Neighboring gene BSD domain containing 1 Neighboring gene zinc finger and BTB domain containing 8A Neighboring gene zinc finger and BTB domain containing 8 opposite strand

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_041743.1 Chromosome 16 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
zinc finger and BTB domain-containing protein 8B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041743.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    41658420..41668058
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029081551.2 → XP_028937384.1  zinc finger and BTB domain-containing protein 8B

    UniProtKB/TrEMBL
    A0A6I8N6G8
    Conserved Domains (4) summary
    sd00017
    Location:334 → 354
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13909
    Location:332 → 356
    zf-H2C2_5; C2H2-type zinc-finger domain
    pfam13465
    Location:347 → 371
    zf-H2C2_2; Zinc-finger double domain
    cd18330
    Location:6 → 118
    BTB_POZ_ZBTB8B; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 8B (ZBTB8B)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.