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MLXIPL MLX interacting protein like [ Equus caballus (horse) ]

Gene ID: 100059888, updated on 17-Aug-2024

Summary

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Official Symbol
MLXIPLprovided by VGNC
Official Full Name
MLX interacting protein likeprovided by VGNC
Primary source
VGNC:VGNC:20216
See related
Ensembl:ENSECAG00000021590
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See MLXIPL in Genome Data Viewer
Location:
chromosome: 13
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 13 NC_009156.3 (11564072..11595072, complement)

Chromosome 13 - NC_009156.3Genomic Context describing neighboring genes Neighboring gene BAF chromatin remodeling complex subunit BCL7B Neighboring gene transducin beta like 2 Neighboring gene VPS37D subunit of ESCRT-I Neighboring gene DnaJ heat shock protein family (Hsp40) member C30 Neighboring gene BUD23 rRNA methyltransferase and ribosome maturation factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009156.3 Chromosome 13 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate-responsive element-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009156.3 Reference EquCab3.0 Primary Assembly

    Range
    11564072..11595072 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023655447.1 → XP_023511215.1  carbohydrate-responsive element-binding protein isoform X8

    Conserved Domains (3) summary
    cd00083
    Location:557 → 617
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    cd14686
    Location:603 → 633
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
    cl26464
    Location:85 → 558
    Atrophin-1; Atrophin-1 family

  2. XM_023655443.1 → XP_023511211.1  carbohydrate-responsive element-binding protein isoform X3

    UniProtKB/TrEMBL
    A0A9L0RQF2
    Conserved Domains (2) summary
    cd00083
    Location:708 → 768
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    cl26464
    Location:262 → 709
    Atrophin-1; Atrophin-1 family

  3. XM_023655442.1 → XP_023511210.1  carbohydrate-responsive element-binding protein isoform X2

    UniProtKB/TrEMBL
    A0A9L0RQF2
    Conserved Domains (2) summary
    cd00083
    Location:709 → 769
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    cl26464
    Location:472 → 697
    Atrophin-1; Atrophin-1 family

  4. XM_023655441.1 → XP_023511209.1  carbohydrate-responsive element-binding protein isoform X1

    UniProtKB/TrEMBL
    A0A9L0RQF2
    Conserved Domains (2) summary
    cd00083
    Location:734 → 794
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    cl26464
    Location:262 → 735
    Atrophin-1; Atrophin-1 family

  5. XM_023655446.1 → XP_023511214.1  carbohydrate-responsive element-binding protein isoform X6

    UniProtKB/TrEMBL
    A0A9L0RQF2
    Conserved Domains (2) summary
    cd00083
    Location:678 → 738
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    cl26464
    Location:441 → 666
    Atrophin-1; Atrophin-1 family

  6. XM_023655445.1 → XP_023511213.1  carbohydrate-responsive element-binding protein isoform X5

    UniProtKB/TrEMBL
    A0A9L0RQF2
    Conserved Domains (2) summary
    cd00083
    Location:703 → 763
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    cl26464
    Location:262 → 704
    Atrophin-1; Atrophin-1 family

  7. XM_014729924.2 → XP_014585410.1  carbohydrate-responsive element-binding protein isoform X4

    UniProtKB/TrEMBL
    A0A9L0RQF2
    Related
    ENSECAP00000063959.1, ENSECAT00000094906.1
    Conserved Domains (1) summary
    cd00083
    Location:703 → 763
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...

  8. XM_001504504.4 → XP_001504554.1  carbohydrate-responsive element-binding protein isoform X7

    UniProtKB/TrEMBL
    A0A9L0RQF2
    Related
    ENSECAP00000019095.2, ENSECAT00000023069.4
    Conserved Domains (1) summary
    cd00083
    Location:647 → 707
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...

  9. XM_023655448.1 → XP_023511216.1  carbohydrate-responsive element-binding protein isoform X8

    Conserved Domains (3) summary
    cd00083
    Location:557 → 617
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    cd14686
    Location:603 → 633
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
    cl26464
    Location:85 → 558
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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