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lepa leptin [ Oryzias latipes (Japanese medaka) ]

Gene ID: 100049298, updated on 18-Aug-2023

Summary

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Gene symbol
lepa
Gene description
leptin
See related
EnsemblRapid:ENSORLG00000009612
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Also known as
lep
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Genomic context

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See lepa in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 6 NC_019864.2 (20011589..20013652)
102 previous assembly ASM31367v1 (GCF_000313675.1) 6 NC_019864.1 (14851452..14853344)

Chromosome 6 - NC_019864.2Genomic Context describing neighboring genes Neighboring gene hepatocyte growth factor b Neighboring gene leucine rich repeat containing 4.2 Neighboring gene uncharacterized LOC101156969 Neighboring gene RNA binding motif protein 28

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of cDNA coding for a homologue to mammalian leptin from pufferfish, Takifugu rubripes. Kurokawa T, et al. Peptides, 2005 May. PMID 15808904
  2. Genomic characterization of multiple leptin genes and a leptin receptor gene in the Japanese medaka, Oryzias latipes. Kurokawa T, et al. Gen Comp Endocrinol, 2009 Apr. PMID 19523397
  3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
leptin-A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001104720.3 → NP_001098190.2  leptin-A precursor

    See identical proteins and their annotated locations for NP_001098190.2

    Status: PROVISIONAL

    Source sequence(s)
    AB193548
    UniProtKB/Swiss-Prot
    Q588F9
    UniProtKB/TrEMBL
    A0A3P9JFS7
    Related
    ENSORLP00000012052.1, ENSORLT00000012053.2

RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019864.2 Reference ASM223467v1 Primary Assembly

    Range
    20011589..20013652
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023955369.1 → XP_023811137.1  leptin-A isoform X1

    UniProtKB/TrEMBL
    A0A3B3IME9, A0A3P9JFS7
    Related
    ENSORLP00000045049.1, ENSORLT00000037502.2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q588F9.2 GenPept UniProtKB/Swiss-Prot:Q588F9

Gene LinkOut

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Molecular Biology Databases
Research Materials