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    AT1G63770 Peptidase M1 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842681, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT1G63770
    Gene description
    Peptidase M1 family protein
    Primary source
    Araport:AT1G63770
    Locus tag
    AT1G63770
    See related
    TAIR:AT1G63770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24D7.4; F24D7_4
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    Genomic context

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    See AT1G63770 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    34
    Sequence:
    Chromosome: 1; NC_003070.9 (23657506..23664793, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Disease resistance protein (TIR-NBS-LRR class) family Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene Ribosomal RNA processing Brix domain protein Neighboring gene tRNA-Thr

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A puromycin-sensitive aminopeptidase is essential for meiosis in Arabidopsis thaliana. Sánchez-Morán E, et al. Plant Cell, 2004 Nov. PMID 15522847, Free PMC Article
    2. A multi-step peptidolytic cascade for amino acid recovery in chloroplasts. Teixeira PF, et al. Nat Chem Biol, 2017 Jan. PMID 27820795
    3. Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. Shimaoka T, et al. Plant Cell Physiol, 2004 Jun. PMID 15215502
    4. Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. Bindschedler LV, et al. Phytochemistry, 2008 Jul. PMID 18538804
    5. The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. Peltier JB, et al. Mol Cell Proteomics, 2006 Jan. PMID 16207701

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001124071.5
    NM_001160970.1
    NM_001334124.1
    NM_001334125.1
    NM_001334126.1
    NM_105053.3
    NM_202354.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in apoplast HDA PubMed 
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast envelope HDA PubMed 
    located_in chloroplast stroma HDA PubMed 
    located_in nucleus HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane HDA PubMed 
    located_in vacuole HDA PubMed 

    General protein information

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    Preferred Names
    Peptidase M1 family protein
    NP_001117543.4
    • Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; LOCATED IN: apoplast, chloroplast, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 7901 Blast hits to 7867 proteins in 1782 species: Archae - 112; Bacteria - 3789; Metazoa - 1713; Fungi - 432; Plants - 227; Viruses - 0; Other Eukaryotes - 1628 (source: NCBI BLink).
    NP_001154442.1
    • Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 7874 Blast hits to 7842 proteins in 1773 species: Archae - 112; Bacteria - 3764; Metazoa - 1717; Fungi - 430; Plants - 225; Viruses - 0; Other Eukaryotes - 1626 (source: NCBI BLink).
    NP_001319311.1
    • Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1).
    NP_176563.3
    • Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: in 6 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 7682 Blast hits to 7653 proteins in 1759 species: Archae - 112; Bacteria - 3674; Metazoa - 1678; Fungi - 451; Plants - 221; Viruses - 0; Other Eukaryotes - 1546 (source: NCBI BLink).
    NP_974083.1
    • Peptidase M1 family protein; FUNCTIONS IN: metallopeptidase activity, zinc ion binding; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: apoplast, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M1, membrane alanine aminopeptidase (InterPro:IPR001930), Peptidase M1, membrane alanine aminopeptidase, N-terminal (InterPro:IPR014782), Peptidase M1, alanyl aminopeptidase (InterPro:IPR012779); BEST Arabidopsis thaliana protein match is: aminopeptidase M1 (TAIR:AT4G33090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      23657506..23664793 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001160970.1 → NP_001154442.1  Peptidase M1 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154442.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W6H1, A0A7G2E3S4
      Conserved Domains (2) summary
      cd09600
      Location:11 → 893
      M1_APN_1; Peptidase M1 family containing Aminopeptidase N
      PRK14015
      Location:1 → 895
      pepN; aminopeptidase N; Provisional

    2. NM_001124071.5 → NP_001117543.4  Peptidase M1 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001117543.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WT78, F4I3R0
      Conserved Domains (2) summary
      cd09600
      Location:103 → 985
      M1_APN_1; Peptidase M1 family containing Aminopeptidase N
      PRK14015
      Location:92 → 987
      pepN; aminopeptidase N; Provisional

    3. NM_202354.1 → NP_974083.1  Peptidase M1 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974083.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EL45, B3H621
      Conserved Domains (2) summary
      cd09600
      Location:103 → 930
      M1_APN_1; Peptidase M1 family containing Aminopeptidase N
      PRK14015
      Location:92 → 930
      pepN; aminopeptidase N; Provisional

    4. NM_105053.3 → NP_176563.3  Peptidase M1 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176563.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EL45, F4I3R4
      Conserved Domains (2) summary
      cd09600
      Location:103 → 891
      M1_APN_1; Peptidase M1 family containing Aminopeptidase N
      TIGR02414
      Location:104 → 902
      pepN_proteo; aminopeptidase N, Escherichia coli type

    5. NM_001334126.1 → NP_001322486.1  Peptidase M1 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I3R2, Q0WMR3, Q8H0S9, Q9CAE1, Q9CAJ3
      UniProtKB/TrEMBL
      A0A178W6H1, A0A7G2E3S4

    6. NM_001334125.1 → NP_001322487.1  Peptidase M1 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W810, A0A7G2DZR6, F4I3R1

    7. NM_001334124.1 → NP_001319311.1  Peptidase M1 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W810, A0A7G2DZR6, F4I3R1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8H0S9.1

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