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    AT1G61850 phospholipase A I-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842482, updated on 7-Sep-2023

    Summary

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    Gene symbol
    AT1G61850
    Gene description
    phospholipase A I-like protein
    Primary source
    Araport:AT1G61850
    Locus tag
    AT1G61850
    See related
    TAIR:AT1G61850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F8K4.6; F8K4_6
    Summary
    Encodes a non-specific lipase that hydrolyzes phospholipids as well as galactolipids, at both sn-1 and sn-2 positions. Involved in basal jasmonic acid biosynthesis by releasing the precursor fatty acid from membrane lipids. Mutant plants were impacted in resistance to fungus B. cinerea.
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    Genomic context

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    See AT1G61850 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    17
    Sequence:
    Chromosome: 1; NC_003070.9 (22855751..22862398)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene Protein kinase superfamily protein Neighboring gene pentatricopeptide repeat 336

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mutants of phospholipase A (pPLA-I) have a red light and auxin phenotype. Effendi Y, et al. Plant Cell Environ, 2014 Jul. PMID 24433169
    2. Gravity-dependent differentiation and root coils in Arabidopsis thaliana wild type and phospholipase-A-I knockdown mutant grown on the International Space Station. Scherer GF, et al. Plant Biol (Stuttg), 2014 Jan. PMID 24373011
    3. AtPLAI is an acyl hydrolase involved in basal jasmonic acid production and Arabidopsis resistance to Botrytis cinerea. Yang W, et al. J Biol Chem, 2007 Jun 22. PMID 17475618
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. pPLA-I is involved in phytochrome signalling.[pPLA-I]
      Title: Mutants of phospholipase A (pPLA-I) have a red light and auxin phenotype.
    2. phospholipase-A-I knockdown mutant grown in microgravity show differentiation and root coils in Arabidopsis thaliana.[PPLA-I]
      Title: Gravity-dependent differentiation and root coils in Arabidopsis thaliana wild type and phospholipase-A-I knockdown mutant grown on the International Space Station.
    3. AtPLAI is involved in basal JA production and Arabidopsis resistance to the necrotrophic fungus B. cinerea
      Title: AtPLAI is an acyl hydrolase involved in basal jasmonic acid production and Arabidopsis resistance to Botrytis cinerea.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_001198359.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables galactolipase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables phospholipase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within jasmonic acid biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to fungus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    phospholipase A I-like protein
    NP_001185288.2
    • phospholipases;galactolipases; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 2 (TAIR:AT3G26500.1).
    NP_001319289.1
    • phospholipases;galactolipases; FUNCTIONS IN: phospholipase activity, galactolipase activity; INVOLVED IN: response to fungus, jasmonic acid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Armadillo-like helical (InterPro:IPR011989), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 2 (TAIR:AT3G26500.1); Has 20427 Blast hits to 10030 proteins in 743 species: Archae - 51; Bacteria - 3224; Metazoa - 10329; Fungi - 1071; Plants - 3980; Viruses - 0; Other Eukaryotes - 1772 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      22855751..22862398
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334005.1 → NP_001319289.1  phospholipase A I-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHM7, A0A5S9WNQ8, F4HX14

    2. NM_001198359.2 → NP_001185288.2  phospholipase A I-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHM7, A0A2H1ZEE1
    Nucleotide Protein
    Heading Accession and Version

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