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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837609, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT1G10660
    Locus tag
    AT1G10660
    See related
    Araport:AT1G10660
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F20B24.10; F20B24_10
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (3532229..3535137)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ATP-citrate lyase A-1 Neighboring gene P-glycoprotein 10 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A user-friendly platform for yeast two-hybrid library screening using next generation sequencing. Erffelinck ML, et al. PLoS One, 2018. PMID 30576311, Free PMC Article
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_100942.3
    NM_202074.4
    NM_202075.3
    NM_202076.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_172536.1
    • unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 155 Blast hits to 154 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 4; Plants - 139; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    NP_973803.1
    • unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_973804.1
    • unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_973805.1
    • unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3532229..3535137
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_202074.4 → NP_973803.1  uncharacterized protein AT1G10660 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973803.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WCZ1, Q8H101
      Conserved Domains (1) summary
      pfam04750
      Location:189 → 309
      Far-17a_AIG1; FAR-17a/AIG1-like protein

    2. NM_100942.3 → NP_172536.1  uncharacterized protein AT1G10660 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172536.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WCZ1, Q8H101
      Conserved Domains (1) summary
      pfam04750
      Location:189 → 309
      Far-17a_AIG1; FAR-17a/AIG1-like protein

    3. NM_202075.3 → NP_973804.1  uncharacterized protein AT1G10660 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973804.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WCZ1, Q8H101
      Conserved Domains (1) summary
      pfam04750
      Location:189 → 309
      Far-17a_AIG1; FAR-17a/AIG1-like protein

    4. NM_202076.2 → NP_973805.1  uncharacterized protein AT1G10660 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973805.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WCZ1, Q8H101
      Conserved Domains (1) summary
      pfam04750
      Location:189 → 309
      Far-17a_AIG1; FAR-17a/AIG1-like protein
    Nucleotide Protein
    Heading Accession and Version

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