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    Ankyrin repeat family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837285, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ankyrin repeat family protein
    Primary source
    TAIR:AT1G07710
    Locus tag
    AT1G07710
    See related
    Araport:AT1G07710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24B9.19; F24B9_19
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (2386164..2388350, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Thioredoxin superfamily protein Neighboring gene NOT2 / NOT3 / NOT5 family Neighboring gene ncRNA Neighboring gene 3-ketoacyl-CoA synthase 3 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Ankyrin repeat family protein
    NP_001318946.1
    • Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT5G60070.1); Has 71061 Blast hits to 30444 proteins in 1217 species: Archae - 72; Bacteria - 7320; Metazoa - 31750; Fungi - 7301; Plants - 5738; Viruses - 586; Other Eukaryotes - 18294 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      2386164..2388350 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331723.1 → NP_001318946.1  Ankyrin repeat family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W7R5, A0A5S9T4W3, A0A654ECU6, Q9LQP7
      Conserved Domains (4) summary
      COG0666
      Location:108 → 312
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:168 → 200
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:31 → 127
      Ank_2; Ankyrin repeats (3 copies)
      pfam13962
      Location:349 → 466
      PGG; Domain of unknown function

    2. NM_100645.2 → NP_172250.1  Ankyrin repeat family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172250.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W7R5, A0A5S9T4W3, A0A654ECU6, Q9LQP7
      Conserved Domains (4) summary
      COG0666
      Location:108 → 312
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:168 → 200
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:31 → 127
      Ank_2; Ankyrin repeats (3 copies)
      pfam13962
      Location:349 → 466
      PGG; Domain of unknown function
    Nucleotide Protein
    Heading Accession and Version

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