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    Plant invertase/pectin methylesterase inhibitor superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836356, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Plant invertase/pectin methylesterase inhibitor superfamily protein
    Primary source
    TAIR:AT5G62350
    Locus tag
    AT5G62350
    See related
    Araport:AT5G62350
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MMI9.21; MMI9_21
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (25037191..25038424)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein Neighboring gene ncRNA Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
    2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_125629.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables enzyme inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within negative regulation of catalytic activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    Plant invertase/pectin methylesterase inhibitor superfamily protein
    NP_201041.1
    • Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G47380.1); Has 780 Blast hits to 773 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 780; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25037191..25038424
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125629.3 → NP_201041.1  Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201041.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UCF3, A0A5S9YGD0, Q8L8T0, Q9LVA4
      Conserved Domains (1) summary
      cd15798
      Location:41 → 200
      PMEI-like_3; Uncharacterized subfamily of plant invertase/pectin methylesterase inhibitor domains
    Nucleotide Protein
    Heading Accession and Version

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