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    RABA4C RAB GTPase homolog A4C [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834847, updated on 18-Sep-2024

    Summary

    Official Symbol
    RABA4C
    Official Full Name
    RAB GTPase homolog A4C
    Primary source
    TAIR:AT5G47960
    Locus tag
    AT5G47960
    See related
    Araport:AT5G47960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATRABA4C; K16F13.4; K16F13_4; RAB GTPase homolog A4C; SMALL MOLECULAR WEIGHT G-PROTEIN 1; SMG1
    Summary
    Encodes a small molecular weight g-protein.
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    Genomic context

    See RABA4C in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (19421340..19422533, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S27 Neighboring gene HXXXD-type acyl-transferase family protein Neighboring gene Aldolase-type TIM barrel family protein Neighboring gene HXXXD-type acyl-transferase family protein Neighboring gene ncRNA

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    RAB GTPase homolog A4C
    NP_199607.1
    • RAB GTPase homolog A4C (RABA4C); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4D (TAIR:AT3G12160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      19421340..19422533 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124170.3NP_199607.1  RAB GTPase homolog A4C [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199607.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FE79
      UniProtKB/TrEMBL
      A0A178UQI5, A0A5S9YEB1
      Conserved Domains (1) summary
      cd01868
      Location:13177
      Rab11_like; Rab GTPase family 11 (Rab11)-like includes Rab11a, Rab11b, and Rab25