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    Eukaryotic aspartyl protease family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832348, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Eukaryotic aspartyl protease family protein
    Primary source
    TAIR:AT5G22850
    Locus tag
    AT5G22850
    See related
    Araport:AT5G22850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MRN17.8; MRN17_8
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    10
    Sequence:
    Chromosome: 5; NC_003076.8 (7633373..7636576, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene GDSL-like lipase/acylhydrolase superfamily protein Neighboring gene ARM repeat superfamily protein Neighboring gene magnesium (Mg) transporter 10 Neighboring gene Protein kinase superfamily protein Neighboring gene ncRNA Neighboring gene Serine carboxypeptidase S28 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_122190.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Eukaryotic aspartyl protease family protein
    NP_197676.2
    • Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G08210.1); Has 4888 Blast hits to 4872 proteins in 390 species: Archae - 0; Bacteria - 0; Metazoa - 1696; Fungi - 940; Plants - 1998; Viruses - 1; Other Eukaryotes - 253 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      7633373..7636576 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122190.3 → NP_197676.2  Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197676.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UGQ9, A0A5S9Y6E1, Q0WRU5
      Conserved Domains (1) summary
      cd05476
      Location:81 → 440
      pepsin_A_like_plant; Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants
    Nucleotide Protein
    Heading Accession and Version

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