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    SERAT3;2 serine acetyltransferase 3;2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829716, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SERAT3;2
    Official Full Name
    serine acetyltransferase 3;2
    Primary source
    TAIR:AT4G35640
    Locus tag
    AT4G35640
    See related
    Araport:AT4G35640
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATSERAT3;2; F8D20.150; F8D20_150; serine acetyltransferase 3;2
    Summary
    Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Expression is induced in both roots and shoots under sulfur-starved conditions.
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    Genomic context

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    See SERAT3;2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    10
    Sequence:
    Chromosome: 4; NC_003075.7 (16905579..16908357, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Cyclin B2;2 Neighboring gene ncRNA Neighboring gene phosphoserine aminotransferase Neighboring gene isocitrate dehydrogenase III Neighboring gene RPM1-interacting protein 4 (RIN4) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of Promoters of Arabidopsis thaliana Divergent Gene Pair SERAT3;2 and IDH-III Shows SERAT3;2 Promoter is Nested Within the IDH-III Promoter. Raipuria RK, et al. Mol Biotechnol, 2017 Jul. PMID 28585118
    2. Characterization and expression analysis of a serine acetyltransferase gene family involved in a key step of the sulfur assimilation pathway in Arabidopsis. Kawashima CG, et al. Plant Physiol, 2005 Jan. PMID 15579666, Free PMC Article
    3. Comparative genomics and reverse genetics analysis reveal indispensable functions of the serine acetyltransferase gene family in Arabidopsis. Watanabe M, et al. Plant Cell, 2008 Sep. PMID 18776059, Free PMC Article
    4. In silico assessment of gene function involved in cysteine biosynthesis in Arabidopsis: expression analysis of multiple isoforms of serine acetyltransferase. Noji M, et al. Amino Acids, 2006 Mar. PMID 16525754
    5. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Study has identified a unique bidirectional promoter capable of driving gene expression in Arabidopsis thaliana, and showed for the first time, that SERAT3;2 promoter is nested in the IDH-III promoter.
      Title: Analysis of Promoters of Arabidopsis thaliana Divergent Gene Pair SERAT3;2 and IDH-III Shows SERAT3;2 Promoter is Nested Within the IDH-III Promoter.
    2. SERAT3;2 may play a major role during seed development.
      Title: Comparative genomics and reverse genetics analysis reveal indispensable functions of the serine acetyltransferase gene family in Arabidopsis.
    3. From the results of sensitivity to feedback regulation, subcellular localization and expression of mRNA analyses, each serine acetyltransferase (SATase) isoform seems to have its specific role for cysteine biosynthesis.
      Title: In silico assessment of gene function involved in cysteine biosynthesis in Arabidopsis: expression analysis of multiple isoforms of serine acetyltransferase.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_119729.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine O-acetyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables serine O-acetyltransferase activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cysteine biosynthetic process from serine IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within sulfate assimilation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine acetyltransferase 3;2
    NP_195289.3
    • serine acetyltransferase 3;2 (SERAT3;2); CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzymes superfamily protein (TAIR:AT2G17640.1); Has 22944 Blast hits to 22937 proteins in 2578 species: Archae - 362; Bacteria - 17118; Metazoa - 7; Fungi - 225; Plants - 280; Viruses - 18; Other Eukaryotes - 4934 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16905579..16908357 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119729.4 → NP_195289.3  serine acetyltransferase 3;2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195289.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81795, Q8W2B8
      UniProtKB/TrEMBL
      A0A178USX0, A0A5S9XZB4
      Conserved Domains (1) summary
      PLN02739
      Location:1 → 355
      PLN02739; serine acetyltransferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8W2B8.1

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