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    FBA7 Aldolase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828758, updated on 18-Sep-2024

    Summary

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    Official Symbol
    FBA7
    Official Full Name
    Aldolase superfamily protein
    Primary source
    TAIR:AT4G26520
    Locus tag
    AT4G26520
    See related
    Araport:AT4G26520
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtFBA7; fructose-bisphosphate aldolase 7; M3E9.50; M3E9_50
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    Genomic context

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    See FBA7 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (13388290..13390862)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Neighboring gene chloroplast sulfur E Neighboring gene uridine kinase-like 4 Neighboring gene Aldolase superfamily protein Neighboring gene Leucine-rich repeat receptor-like protein kinase family protein Neighboring gene ncRNA Neighboring gene Got1/Sft2-like vescicle transport protein family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide transcriptome profiling of the early cadmium response of Arabidopsis roots and shoots. Herbette S, et al. Biochimie, 2006 Nov. PMID 16797112
    2. Global transcription profiling reveals comprehensive insights into hypoxic response in Arabidopsis. Liu F, et al. Plant Physiol, 2005 Mar. PMID 15734912, Free PMC Article
    3. Regulation of plant cytosolic aldolase functions by redox-modifications. van der Linde K, et al. Plant Physiol Biochem, 2011 Sep. PMID 21782461
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_001341808.1
    NM_118785.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables fructose-bisphosphate aldolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables fructose-bisphosphate aldolase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables fructose-bisphosphate aldolase activity NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in gluconeogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in glycolytic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in glycolytic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    acts_upstream_of_or_within pentose-phosphate shunt TAS
    Traceable Author Statement
    more info
    		  
    acts_upstream_of_or_within response to hypoxia IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Aldolase superfamily protein
    NP_194382.1
    • Aldolase superfamily protein; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT4G26530.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13388290..13390862
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001341806.1 → NP_001329762.1  Aldolase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UUU6, A0A1P8B8S7

    2. NM_001341807.1 → NP_001329763.1  Aldolase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UUU6, A0A1P8B8Q8

    3. NM_118785.4 → NP_194382.1  Aldolase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194382.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65582, P22197, Q53YH0
      UniProtKB/TrEMBL
      A0A178UUU6, A0A654FT01
      Conserved Domains (1) summary
      PLN02455
      Location:1 → 358
      PLN02455; fructose-bisphosphate aldolase

    4. NM_001341808.1 → NP_001329761.1  Aldolase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UUU6, A0A1P8B8S7
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P22197.2

    Gene LinkOut

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