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    protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828342, updated on 18-Sep-2024

    Summary

    Official Full Name
    protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
    Primary source
    TAIR:AT4G22470
    Locus tag
    AT4G22470
    See related
    Araport:AT4G22470
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7K2.50; F7K2_50
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    Genomic context

    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (11840134..11841450, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

    General gene information

    NM_118373.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within defense response to other organism IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasmodesma IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
    NP_193978.2
    • protease inhibitor/seed storage/lipid transfer protein (LTP) family protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, hypocotyl, sepal, stamen; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G22485.1); Has 219939 Blast hits to 80042 proteins in 2746 species: Archae - 655; Bacteria - 50351; Metazoa - 79801; Fungi - 26960; Plants - 28532; Viruses - 6737; Other Eukaryotes - 26903 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      11840134..11841450 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118373.3NP_193978.2  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193978.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XUS5, F4JLV4
      Conserved Domains (1) summary
      pfam14547
      Location:297375
      Hydrophob_seed; Hydrophobic seed protein