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    Drought-responsive family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827516, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Drought-responsive family protein
    Primary source
    TAIR:AT4G02200
    Locus tag
    AT4G02200
    See related
    Araport:AT4G02200
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T2H3.13
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (972707..974692)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene syntaxin of plants 42 Neighboring gene ncRNA Neighboring gene Myb/SANT-like DNA-binding domain protein Neighboring gene zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein Neighboring gene Ribosomal protein L19e family protein Neighboring gene AGAMOUS-like 51

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Arabidopsis AtDi19 gene family encodes a novel type of Cys2/His2 zinc-finger protein implicated in ABA-independent dehydration, high-salinity stress and light signaling pathways. Milla MA, et al. Plant Mol Biol, 2006 May. PMID 16786289
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001160728.1
    NM_116453.2
    NM_178955.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Drought-responsive family protein
    NP_001154200.1
    • Drought-responsive family protein; INVOLVED IN: response to water deprivation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT1G02750.1); Has 234 Blast hits to 234 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 234; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_192129.1
    • Drought-responsive family protein; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT1G02750.1); Has 235 Blast hits to 235 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 234; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_849286.1
    • Drought-responsive family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to water deprivation; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT1G02750.1); Has 231 Blast hits to 231 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 230; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      972707..974692
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001160728.1 → NP_001154200.1  Drought-responsive family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154200.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JH94
      Conserved Domains (2) summary
      pfam05605
      Location:42 → 108
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
      pfam14571
      Location:130 → 221
      Di19_C; Stress-induced protein Di19, C-terminal

    2. NM_116453.2 → NP_192129.1  Drought-responsive family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192129.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A8MR81, O04259, Q7G0Q3
      UniProtKB/TrEMBL
      A0A178V362, A0A5S9XQY9
      Conserved Domains (2) summary
      pfam05605
      Location:42 → 94
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
      pfam14571
      Location:116 → 207
      Di19_C; Stress-induced protein Di19, C-terminal

    3. NM_178955.1 → NP_849286.1  Drought-responsive family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849286.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O04259
      Conserved Domains (2) summary
      pfam05605
      Location:42 → 94
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
      pfam14571
      Location:116 → 200
      Di19_C; Stress-induced protein Di19, C-terminal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O04259.2

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