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    AT4G08230 glycine-rich protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826373, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT4G08230
    Gene description
    glycine-rich protein
    Primary source
    Araport:AT4G08230
    Locus tag
    AT4G08230
    See related
    TAIR:AT4G08230
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T12G13.70; T12G13_70
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    Genomic context

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    See AT4G08230 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (5187785..5189794, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Pentatricopeptide repeat (PPR-like) superfamily protein Neighboring gene pseudo Neighboring gene histone-lysine N-methyltransferase Neighboring gene GRAS family transcription factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198
    4. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    NM_001203759.1
    NM_116892.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    glycine-rich protein
    NP_001190688.1
    • glycine-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage.
    NP_192563.2
    • glycine-rich protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      5187785..5189794 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116892.5 → NP_192563.2  glycine-rich protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192563.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V327, A0A7G2EY04, Q8VY68
      Conserved Domains (1) summary
      pfam10961
      Location:2 → 65
      SelK_SelG; Selenoprotein SelK_SelG

    2. NM_001203759.1 → NP_001190688.1  glycine-rich protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190688.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V598, F4JFX0
    Nucleotide Protein
    Heading Accession and Version

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