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    UBC14 ubiquitin-conjugating enzyme 14 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824704, updated on 18-Sep-2024

    Summary

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    Official Symbol
    UBC14
    Official Full Name
    ubiquitin-conjugating enzyme 14
    Primary source
    TAIR:AT3G55380
    Locus tag
    AT3G55380
    See related
    Araport:AT3G55380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ubiquitin-conjugating enzyme 14
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    Genomic context

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    See UBC14 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (20531069..20533285)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene PIF / Ping-Pong family of plant transposase Neighboring gene 3-oxo-5-alpha-steroid 4-dehydrogenase family protein Neighboring gene OBF-binding protein 3 Neighboring gene ncRNA Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene methionyl-tRNA synthetase / methionine-tRNA ligase / MetRS (cpMetRS)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis. Kraft E, et al. Plant Physiol, 2005 Dec. PMID 16339806, Free PMC Article
    2. Protein degradation in signaling. Callis J, et al. Curr Opin Plant Biol, 2000 Oct. PMID 11019805
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001203167.1
    NM_115396.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ubiquitin-protein transferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within ubiquitin-dependent protein catabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within ubiquitin-dependent protein catabolic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ubiquitin-conjugating enzyme 14
    NP_001190096.1
    • ubiquitin-conjugating enzyme 14 (UBC14); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin carrier protein 7 (TAIR:AT5G59300.1).
    NP_567020.1
    • ubiquitin-conjugating enzyme 14 (UBC14); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin carrier protein 7 (TAIR:AT5G59300.1); Has 10102 Blast hits to 10062 proteins in 394 species: Archae - 0; Bacteria - 0; Metazoa - 4371; Fungi - 2215; Plants - 1879; Viruses - 23; Other Eukaryotes - 1614 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      20531069..20533285
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115396.4 → NP_567020.1  ubiquitin-conjugating enzyme 14 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567020.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P42747, Q4TYZ6
      UniProtKB/TrEMBL
      A0A178VE19, A0A384KCZ3, B9DGG2
      Conserved Domains (1) summary
      pfam00179
      Location:19 → 160
      UQ_con; Ubiquitin-conjugating enzyme

    2. NM_001203167.1 → NP_001190096.1  ubiquitin-conjugating enzyme 14 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190096.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IWU7
      Conserved Domains (2) summary
      COG5078
      Location:19 → 197
      COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
      pfam00179
      Location:19 → 194
      UQ_con; Ubiquitin-conjugating enzyme
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P42747.1

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