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    meiosis chromosome segregation family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822305, updated on 18-Sep-2024

    Summary

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    Official Full Name
    meiosis chromosome segregation family protein
    Primary source
    TAIR:AT3G26890
    Locus tag
    AT3G26890
    See related
    Araport:AT3G26890
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (9907150..9911933, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene Plant self-incompatibility protein S1 family Neighboring gene shikimate kinase like 1 Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene FBD / Leucine Rich Repeat domains containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    NM_001035700.1
    NM_001125237.1
    NM_001125238.2
    NM_001203053.1
    NM_001338837.1
    NM_001338838.1
    NM_113601.3
    NM_180306.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    meiosis chromosome segregation family protein
    NP_001030777.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001118709.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001118710.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001189982.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41110.1).
    NP_566803.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41110.1); Has 393 Blast hits to 383 proteins in 134 species: Archae - 0; Bacteria - 61; Metazoa - 171; Fungi - 74; Plants - 80; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
    NP_850637.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41110.1); Has 393 Blast hits to 383 proteins in 134 species: Archae - 0; Bacteria - 61; Metazoa - 171; Fungi - 74; Plants - 80; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      9907150..9911933 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180306.3 → NP_850637.1  meiosis chromosome segregation family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850637.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VI82, A0A5S9XGI3, Q949N7
      Conserved Domains (2) summary
      pfam13889
      Location:569 → 647
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:362 → 406
      DUF4210; Domain of unknown function (DUF4210)

    2. NM_113601.3 → NP_566803.1  meiosis chromosome segregation family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566803.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VI82, A0A5S9XGI3, Q949N7
      Conserved Domains (2) summary
      pfam13889
      Location:569 → 647
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:362 → 406
      DUF4210; Domain of unknown function (DUF4210)

    3. NM_001338837.1 → NP_001325689.1  meiosis chromosome segregation family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VI82, A0A5S9XGI3, Q949N7
      Conserved Domains (2) summary
      pfam13889
      Location:569 → 647
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:362 → 406
      DUF4210; Domain of unknown function (DUF4210)

    4. NM_001125238.2 → NP_001118710.1  meiosis chromosome segregation family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118710.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VI82, A0A5S9XGI3, Q949N7
      Conserved Domains (2) summary
      pfam13889
      Location:569 → 647
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:362 → 406
      DUF4210; Domain of unknown function (DUF4210)

    5. NM_001338838.1 → NP_001325688.1  meiosis chromosome segregation family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VI82, A0A5S9XGI3, Q949N7
      Conserved Domains (2) summary
      pfam13889
      Location:569 → 647
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:362 → 406
      DUF4210; Domain of unknown function (DUF4210)

    6. NM_001203053.1 → NP_001189982.1  meiosis chromosome segregation family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189982.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VK96, A0A7G2ETL2, C0Z2U8
      Conserved Domains (2) summary
      pfam13915
      Location:362 → 405
      DUF4210; Domain of unknown function (DUF4210)
      pfam13889
      Location:568 → 646
      Chromosome_seg; Chromosome segregation during meiosis

    7. NM_001125237.1 → NP_001118709.1  meiosis chromosome segregation family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118709.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VI82, A0A5S9XGI3, Q949N7
      Conserved Domains (2) summary
      pfam13889
      Location:569 → 647
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:362 → 406
      DUF4210; Domain of unknown function (DUF4210)

    8. NM_001035700.1 → NP_001030777.1  meiosis chromosome segregation family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030777.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VI82, A0A5S9XGI3, Q949N7
      Conserved Domains (2) summary
      pfam13889
      Location:569 → 647
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:362 → 406
      DUF4210; Domain of unknown function (DUF4210)
    Nucleotide Protein
    Heading Accession and Version

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