U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Acid phosphatase/vanadium-dependent haloperoxidase-related protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821715, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    Acid phosphatase/vanadium-dependent haloperoxidase-related protein
    Primary source
    TAIR:AT3G21610
    Locus tag
    AT3G21610
    See related
    Araport:AT3G21610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (7608942..7610803, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Senescence/dehydration-associated protein-like protein Neighboring gene Senescence/dehydration-associated protein-like protein Neighboring gene ERD (early-responsive to dehydration stress) family protein Neighboring gene chitin elicitor receptor kinase 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001035664.1
    NM_113056.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Acid phosphatase/vanadium-dependent haloperoxidase-related protein
    NP_001030741.1
    • Acid phosphatase/vanadium-dependent haloperoxidase-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_188798.2
    • Acid phosphatase/vanadium-dependent haloperoxidase-related protein; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1); Has 1115 Blast hits to 1115 proteins in 408 species: Archae - 0; Bacteria - 729; Metazoa - 0; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7608942..7610803 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113056.3 → NP_188798.2  Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188798.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XFW7, A0A654FES3, Q8L7M6
      Conserved Domains (1) summary
      pfam02681
      Location:38 → 165
      DUF212; Divergent PAP2 family

    2. NM_001035664.1 → NP_001030741.1  Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030741.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IXN1
      Conserved Domains (1) summary
      pfam02681
      Location:4 → 113
      DUF212; Divergent PAP2 family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.