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    Plant stearoyl-acyl-carrier-protein desaturase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820773, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Plant stearoyl-acyl-carrier-protein desaturase family protein
    Primary source
    TAIR:AT3G02630
    Locus tag
    AT3G02630
    See related
    Araport:AT3G02630
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F16B3.26; F16B3_26
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (562030..564870)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene plant stearoyl-acyl-carrier desaturase family protein Neighboring gene Plant stearoyl-acyl-carrier-protein desaturase family protein Neighboring gene uncharacterized protein Neighboring gene transmembrane protein, putative (DUF247)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Conserved Function of ACYL-ACYL CARRIER PROTEIN DESATURASE 5 on Seed Oil and Oleic Acid Biosynthesis between Arabidopsis thaliana and Brassica napus. Jin C, et al. Front Plant Sci, 2017. PMID 28791041, Free PMC Article
    2. The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. Peltier JB, et al. Mol Cell Proteomics, 2006 Jan. PMID 16207701
    3. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    4. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_111131.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables stearoyl-[ACP] desaturase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within fatty acid metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast stroma HDA PubMed 

    General protein information

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    Preferred Names
    Plant stearoyl-acyl-carrier-protein desaturase family protein
    NP_186912.1
    • Plant stearoyl-acyl-carrier-protein desaturase family protein; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding; INVOLVED IN: oxidation reduction, fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT5G16240.1); Has 934 Blast hits to 926 proteins in 218 species: Archae - 0; Bacteria - 428; Metazoa - 2; Fungi - 0; Plants - 447; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      562030..564870
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111131.3 → NP_186912.1  Plant stearoyl-acyl-carrier-protein desaturase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_186912.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L468, Q8LBC6, Q9M879
      UniProtKB/TrEMBL
      A0A178VB94, A0A5S9X8I5
      Conserved Domains (1) summary
      PLN00179
      Location:3 → 395
      PLN00179; acyl- [acyl-carrier protein] desaturase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M879.1

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