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    AT3G13420 uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820542, updated on 7-Sep-2023

    Summary

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    Gene symbol
    AT3G13420
    Gene description
    uncharacterized protein
    Primary source
    Araport:AT3G13420
    Locus tag
    AT3G13420
    See related
    TAIR:AT3G13420
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    See AT3G13420 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (4364480..4366969)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Neighboring gene RING/U-box superfamily protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001338048.1
    NM_001338049.1
    NM_112187.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_187950.2
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55535.1); Has 66 Blast hits to 66 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4364480..4366969
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338047.1 → NP_001327506.1  uncharacterized protein AT3G13420 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VIC9, A0A384KIV2, A0A5S9XBR8, B2GVM5

    2. NM_112187.3 → NP_187950.2  uncharacterized protein AT3G13420 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187950.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VIC9, A0A384KIV2, A0A5S9XBR8, B2GVM5

    3. NM_001338048.1 → NP_001327508.1  uncharacterized protein AT3G13420 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VGS0, A0A1I9LSJ0, A0A384KWE6, A0A5S9XBR8

    4. NM_001338049.1 → NP_001327507.1  uncharacterized protein AT3G13420 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VGS0, A0A1I9LSJ0, A0A384KWE6, A0A5S9XBR8
    Nucleotide Protein
    Heading Accession and Version

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