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    AT2G40270 Protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818619, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT2G40270
    Gene description
    Protein kinase family protein
    Primary source
    Araport:AT2G40270
    Locus tag
    AT2G40270
    See related
    TAIR:AT2G40270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T7M7.19
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    Genomic context

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    See AT2G40270 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (16821934..16825160, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Homeodomain-like superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene Eukaryotic translation initiation factor 2 subunit 1 Neighboring gene ferritin 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197
    3. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_129585.5
    NM_201918.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Protein kinase family protein
    NP_565925.1
    • Protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G56050.2); Has 40621 Blast hits to 40281 proteins in 1597 species: Archae - 8; Bacteria - 2197; Metazoa - 11172; Fungi - 1041; Plants - 22757; Viruses - 129; Other Eukaryotes - 3317 (source: NCBI BLink).
    NP_973647.1
    • Protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G56050.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      16821934..16825160 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129585.5 → NP_565925.1  Protein kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565925.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3EBJ0, Q9SIZ4, Q9XEF4
      UniProtKB/TrEMBL
      A0A5S9X5N0
      Conserved Domains (2) summary
      smart00221
      Location:202 → 460
      STYKc; Protein kinase; unclassified specificity
      cl21453
      Location:206 → 466
      PKc_like; Protein Kinases, catalytic domain

    2. NM_201918.1 → NP_973647.1  Protein kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973647.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X5N0, F4IH11
      Conserved Domains (2) summary
      smart00221
      Location:195 → 453
      STYKc; Protein kinase; unclassified specificity
      cl21453
      Location:199 → 459
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SIZ4.2

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