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    CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818225, updated on 18-Sep-2024

    Summary

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    Official Full Name
    CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein
    Primary source
    TAIR:AT2G36500
    Locus tag
    AT2G36500
    See related
    Araport:AT2G36500
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1O11.13; F1O11_13
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (15317873..15320175)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pre-mRNA cleavage complex 2 Pcf11-like protein Neighboring gene ncRNA Neighboring gene demeter-like 1 Neighboring gene tRNA-Leu Neighboring gene tRNA-Leu

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_129208.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein
    NP_181191.1
    • CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein (TAIR:AT3G52950.2); Has 7037 Blast hits to 5620 proteins in 1431 species: Archae - 828; Bacteria - 4978; Metazoa - 7; Fungi - 125; Plants - 270; Viruses - 0; Other Eukaryotes - 829 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15317873..15320175
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129208.4 → NP_181191.1  CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181191.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84TJ1, Q9SJQ5
      UniProtKB/TrEMBL
      A0A178VZG3, A0A5S9X4H5, A0A654FA17
      Conserved Domains (3) summary
      cd06409
      Location:409 → 489
      PB1_MUG70; The MUG70 protein is a product of the meiotically up-regulated gene 70 which has a role in meiosis and harbors a PB1 domain. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell ...
      cd17781
      Location:67 → 183
      CBS_pair_MUG70_1; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains similar to MUG70 repeat1
      cd17782
      Location:231 → 347
      CBS_pair_MUG70_2; Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains similar to MUG70 repeat2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SJQ5.1

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