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    AT2G30690 lateral signaling target-like protein (Protein of unknown function, DUF593) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817619, updated on 7-Sep-2023

    Summary

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    Gene symbol
    AT2G30690
    Gene description
    lateral signaling target-like protein (Protein of unknown function, DUF593)
    Primary source
    Araport:AT2G30690
    Locus tag
    AT2G30690
    See related
    TAIR:AT2G30690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T11J7.8; T11J7_8
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    Genomic context

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    See AT2G30690 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (13075966..13079116)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene callose synthase-like protein Neighboring gene bacterial trigger factor Neighboring gene GPI-anchored protein Neighboring gene Ypt/Rab-GAP domain of gyp1p superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Myosin-driven transport network in plants. Kurth EG, et al. Proc Natl Acad Sci U S A, 2017 Feb 21. PMID 28096376, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001336280.1
    NM_128621.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables myosin XI tail binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    lateral signaling target-like protein (Protein of unknown function, DUF593)
    NP_001318321.1
    • Protein of unknown function, DUF593; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF593 (TAIR:AT1G08800.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13075966..13079116
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336280.1 → NP_001318321.1  lateral signaling target-like protein (Protein of unknown function, DUF593) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4INW9, O49334
      UniProtKB/TrEMBL
      A0A178VX69

    2. NM_128621.3 → NP_180627.2  lateral signaling target-like protein (Protein of unknown function, DUF593) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180627.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4INW9, O49334
      UniProtKB/TrEMBL
      A0A178VX69
      Conserved Domains (2) summary
      PTZ00438
      Location:469 → 586
      PTZ00438; gamete antigen 27/25-like protein; Provisional
      pfam04576
      Location:616 → 705
      Zein-binding; Zein-binding
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4INW9.1

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