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    SFH3 SEC14-like 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816693, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SFH3
    Official Full Name
    SEC14-like 3
    Primary source
    TAIR:AT2G21540
    Locus tag
    AT2G21540
    See related
    Araport:AT2G21540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATSFH3; F3K23.30; SEC14-like 3; SEC14-LIKE 3
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    Genomic context

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    See SFH3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    16
    Sequence:
    Chromosome: 2; NC_003071.7 (9220505..9224496, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene Sec14p-like phosphatidylinositol transfer family protein Neighboring gene SMAD/FHA domain-containing protein Neighboring gene Bifunctional dihydrofolate reductase/thymidylate synthase Neighboring gene nucleolar-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of two phosphatidylinositol/phosphatidylcholine transfer protein genes that are predominately transcribed in the flowers of Arabidopsis thaliana. Mo P, et al. J Plant Physiol, 2007 Apr. PMID 16697077
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036312.2
    NM_001202642.2
    NM_001335761.1
    NM_001335762.1
    NM_001335763.1
    NM_127726.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphatidylinositol transfer activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within flower development IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SEC14-like 3
    NP_001031389.1
    • SEC14-like 3 (SFH3); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: flower development, transport; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39180.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001189571.1
    • SEC14-like 3 (SFH3); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: flower development, transport; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39180.1).
    NP_001318263.1
    • SEC14-like 3 (SFH3); FUNCTIONS IN: phosphatidylinositol transporter activity; INVOLVED IN: flower development, transport; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39180.2); Has 2999 Blast hits to 2982 proteins in 239 species: Archae - 0; Bacteria - 1; Metazoa - 974; Fungi - 679; Plants - 897; Viruses - 0; Other Eukaryotes - 448 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9220505..9224496 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335761.1 → NP_001318263.1  SEC14-like 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q93ZE9, Q9SIK5
      UniProtKB/TrEMBL
      A0A178VVA6, A0A5S9X0C1

    2. NM_001036312.2 → NP_001031389.1  SEC14-like 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031389.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q93ZE9, Q9SIK5
      UniProtKB/TrEMBL
      A0A178VVA6, A0A5S9X0C1
      Conserved Domains (2) summary
      smart00516
      Location:137 → 307
      SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
      smart01100
      Location:71 → 117
      CRAL_TRIO_N; CRAL/TRIO, N-terminal domain

    3. NM_001335762.1 → NP_001323476.1  SEC14-like 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VVA6, A0A5S9X0C1, A0A654EZY3, F4IHJ2
      Conserved Domains (2) summary
      smart00516
      Location:137 → 307
      SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
      smart01100
      Location:71 → 117
      CRAL_TRIO_N; CRAL/TRIO, N-terminal domain

    4. NM_127726.2 → NP_565514.1  SEC14-like 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565514.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q93ZE9, Q9SIK5
      UniProtKB/TrEMBL
      A0A178VVA6, A0A5S9X0C1
      Conserved Domains (2) summary
      smart00516
      Location:137 → 307
      SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
      smart01100
      Location:71 → 117
      CRAL_TRIO_N; CRAL/TRIO, N-terminal domain

    5. NM_001335763.1 → NP_001323475.1  SEC14-like 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q93ZE9, Q9SIK5
      UniProtKB/TrEMBL
      A0A178VVA6, A0A5S9X0C1

    6. NM_001202642.2 → NP_001189571.1  SEC14-like 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189571.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VVA6, A0A5S9X0C1, A0A654EZY3, F4IHJ2
      Conserved Domains (2) summary
      smart00516
      Location:137 → 307
      SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
      smart01100
      Location:71 → 117
      CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q93ZE9.1

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