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    si:dkeyp-72h1.1 si:dkeyp-72h1.1 [ Danio rerio (zebrafish) ]

    Gene ID: 799956, updated on 2-Nov-2024

    Summary

    Official Symbol
    si:dkeyp-72h1.1provided by ZNC
    Official Full Name
    si:dkeyp-72h1.1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050208-447
    See related
    Ensembl:ENSDARG00000095347 AllianceGenome:ZFIN:ZDB-GENE-050208-447
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to act upstream of or within regulation of DNA-templated transcription. Predicted to be located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See si:dkeyp-72h1.1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 20 NC_007131.7 (18551626..18595559)
    105 previous assembly GRCz10 (GCF_000002035.5) 20 NC_007131.6 (18652013..18695979)

    Chromosome 20 - NC_007131.7Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase pim-3 Neighboring gene CDC42 binding protein kinase beta (DMPK-like) Neighboring gene uncharacterized LOC137488635 Neighboring gene uncharacterized LOC137488636 Neighboring gene tumor necrosis factor, alpha-induced protein 2a Neighboring gene eukaryotic translation initiation factor 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    uncharacterized protein LOC799956

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001082935.2NP_001076404.1  uncharacterized protein LOC799956

      See identical proteins and their annotated locations for NP_001076404.1

      Status: PREDICTED

      Source sequence(s)
      BX510992, CR352309
      UniProtKB/TrEMBL
      A0A8M2B7A9, Q5RG37
      Related
      ENSDARP00000146254.1, ENSDART00000185310.1
      Conserved Domains (1) summary
      pfam15317
      Location:183
      Lbh; Cardiac transcription factor regulator, Developmental protein

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007131.7 Reference GRCz11 Primary Assembly

      Range
      18551626..18595559
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005160472.5XP_005160529.1  uncharacterized protein LOC799956 isoform X1

      See identical proteins and their annotated locations for XP_005160529.1

      UniProtKB/TrEMBL
      A0A8M2B7A9, Q5RG37
      Related
      ENSDARP00000113041.1, ENSDART00000147001.3
      Conserved Domains (1) summary
      pfam15317
      Location:183
      Lbh; Cardiac transcription factor regulator, Developmental protein