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    Obp1b odorant binding protein IB [ Mus musculus (house mouse) ]

    Gene ID: 628991, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Obp1bprovided by MGI
    Official Full Name
    odorant binding protein IBprovided by MGI
    Primary source
    MGI:MGI:1277948
    See related
    Ensembl:ENSMUSG00000067679 AllianceGenome:MGI:1277948
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    OBP7; OBP-1b; EG628991
    Summary
    Predicted to enable odorant binding activity. Predicted to be involved in sensory perception of smell. Predicted to be located in extracellular region. Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See Obp1b in Genome Data Viewer
    Location:
    X B; X 38.33 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (77230414..77235848)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (78186808..78192242)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene odorant binding protein IA Neighboring gene predicted gene 5938 Neighboring gene STARR-seq mESC enhancer starr_47420 Neighboring gene STARR-seq mESC enhancer starr_47421 Neighboring gene predicted gene 14743 Neighboring gene STARR-seq mESC enhancer starr_47422 Neighboring gene STARR-seq mESC enhancer starr_47423 Neighboring gene predicted gene 8749

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Abundant secretory lipocalins displaying male and lactation-specific expression in adult hamster submandibular gland. cDNA cloning and sex hormone-regulated repression. Thavathiru E, et al. Eur J Biochem, 1999 Dec. PMID 10561587
    2. Cloning and expression of odorant-binding proteins Ia and Ib from mouse nasal tissue. Pes D, et al. Gene, 1998 May 28. PMID 9661663
    3. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    enables odorant binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables small molecule binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    odorant-binding protein 1b
    Names
    odorant binding protein 7
    odorant-binding protein Ib

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001310328.1 → NP_001297257.1  odorant-binding protein 1b precursor

      Status: VALIDATED

      Source sequence(s)
      AL671961, BX571702
      Consensus CDS
      CCDS81146.1
      UniProtKB/Swiss-Prot
      A2AEP0, P97337
      UniProtKB/TrEMBL
      A0A0D3M033
      Related
      ENSMUSP00000085528.4, ENSMUST00000088198.4
      Conserved Domains (1) summary
      pfam00061
      Location:26 → 156
      Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      77230414..77235848
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A2AEP0.1 GenPept UniProtKB/Swiss-Prot:A2AEP0

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