ndufb11 NADH:ubiquinone oxidoreductase subunit B11 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: ndufb11provided by ZNC
Official Full Name: NADH:ubiquinone oxidoreductase subunit B11provided by ZNC
Primary source: ZFIN:ZDB-GENE-050309-25
See related: Ensembl:ENSDARG00000043467 AllianceGenome:ZFIN:ZDB-GENE-050309-25
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: im:6897973; si:dkey-6n6.4
Summary: Acts upstream of or within heart development and vasculature development. Predicted to be located in membrane. Predicted to be part of respiratory chain complex I. Is expressed in several structures, including alar plate midbrain region; digestive system; intestinal bulb primordium; optic tectum; and pectoral fin. Human ortholog(s) of this gene implicated in linear skin defects with multiple congenital anomalies 3 and nuclear type mitochondrial complex I deficiency 30. Orthologous to human NDUFB11 (NADH:ubiquinone oxidoreductase subunit B11). [provided by Alliance of Genome Resources, Oct 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 8

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	8	NC_007119.7 (14180064..14184423, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	8	NC_007119.6 (14142359..14146718, complement)

Chromosome 8 - NC_007119.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within heart development	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within vasculature development	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
part_of respiratory chain complex I	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial

Names: NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001044981.1 → NP_001038446.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial

Status: PROVISIONAL

Source sequence(s)

BX004884

UniProtKB/TrEMBL

A0A8M1N9R9, Q1LYN0

Related

ENSDARP00000063816.6, ENSDART00000063817.7

Conserved Domains (1) summary

pfam10183
Location:26 → 129

ESSS; ESSS subunit of NADH:ubiquinone oxidoreductase (complex I)