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    NUTM2F NUT family member 2F [ Homo sapiens (human) ]

    Gene ID: 54754, updated on 17-Sep-2024

    Summary

    Official Symbol
    NUTM2Fprovided by HGNC
    Official Full Name
    NUT family member 2Fprovided by HGNC
    Primary source
    HGNC:HGNC:23450
    See related
    Ensembl:ENSG00000130950 AllianceGenome:HGNC:23450
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    NUTMF; FAM22F
    Expression
    Biased expression in testis (RPKM 1.2), skin (RPKM 0.1) and 2 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See NUTM2F in Genome Data Viewer
    Location:
    9q22.32
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (94318198..94328644, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (106487812..106498251, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (97080480..97090926, complement)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2603 Neighboring gene uncharacterized LOC124902332 Neighboring gene NANOG hESC enhancer GRCh37_chr9:97012845-97013355 Neighboring gene H3K27ac-H3K4me1 hESC enhancers GRCh37_chr9:97021099-97021744 and GRCh37_chr9:97021745-97022391 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:97022392-97023037 Neighboring gene zinc finger protein 169 Neighboring gene NANOG hESC enhancer GRCh37_chr9:97044568-97045069 Neighboring gene voltage dependent anion channel 1 pseudogene 11 Neighboring gene uncharacterized LOC105376154 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:97080767-97081446 Neighboring gene uncharacterized LOC124902217 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20055 Neighboring gene uncharacterized LOC100132077 Neighboring gene proline-rich nuclear receptor coactivator 2-like Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:97103095-97103595

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    NUT family member 2F
    Names
    family with sequence similarity 22, member F
    protein FAM22F

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_017561.2NP_060031.1  NUT family member 2F

      See identical proteins and their annotated locations for NP_060031.1

      Status: VALIDATED

      Source sequence(s)
      AL691447, BC130390
      Consensus CDS
      CCDS47994.1
      UniProtKB/Swiss-Prot
      A1L443, B6ZDF0, Q5SR58, Q5SR59, Q9UFB1
      UniProtKB/TrEMBL
      B7ZLH0
      Related
      ENSP00000253262.4, ENST00000253262.9
      Conserved Domains (1) summary
      pfam12881
      Location:14743
      NUT; NUT protein

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      94318198..94328644 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060933.1 Alternate T2T-CHM13v2.0

      Range
      106487812..106498251 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)