cyb561d2 cytochrome b561 family, member D2 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: cyb561d2provided by ZNC
Official Full Name: cytochrome b561 family, member D2provided by ZNC
Primary source: ZFIN:ZDB-GENE-041010-205
See related: Ensembl:ENSDARG00000044114 AllianceGenome:ZFIN:ZDB-GENE-041010-205
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:101593
Summary: Predicted to enable heme binding activity and oxidoreductase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human CYB561D2 (cytochrome b561 family member D2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 22

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	22	NC_007133.7 (10639440..10641868, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	22	NC_007133.6 (10609758..10612186, complement)

Chromosome 22 - NC_007133.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables heme binding	IBA Inferred from Biological aspect of Ancestor more info
enables oxidoreductase activity	IBA Inferred from Biological aspect of Ancestor more info
enables transmembrane ascorbate ferrireductase activity	IEA Inferred from Electronic Annotation more info
enables transmembrane monodehydroascorbate reductase activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in endoplasmic reticulum	IBA Inferred from Biological aspect of Ancestor more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: transmembrane reductase CYB561D2

Names: cytochrome b-561 domain containing 2

NP_001006102.1

EC 7.2.1.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001006102.1 → NP_001006102.1 transmembrane reductase CYB561D2

Status: PROVISIONAL

Source sequence(s)

BC083213

UniProtKB/TrEMBL

Q5XJT3

Related

ENSDARP00000064771.4, ENSDART00000064772.5

Conserved Domains (1) summary

cd08761
Location:26 → 205

Cyt_b561_CYB561D2_like; Eukaryotic cytochrome b(561), including the CYB561D2 gene product