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    TMEM53 transmembrane protein 53 [ Gallus gallus (chicken) ]

    Gene ID: 424581, updated on 17-Aug-2024

    Summary

    Symbol
    TMEM53provided by CGNC
    Full Name
    transmembrane protein 53provided by CGNC
    Primary source
    CGNC:7683
    See related
    Ensembl:ENSGALG00010025612
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
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    Genomic context

    See TMEM53 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (20421656..20424874, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (20428888..20432106, complement)

    Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene ERI1 exoribonuclease family member 3 Neighboring gene ring finger protein 220 Neighboring gene uncharacterized LOC107054058 Neighboring gene U5 spliceosomal RNA Neighboring gene chromosome 1 open reading frame 228

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001277580.2NP_001264509.2  transmembrane protein 53

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000239
      UniProtKB/TrEMBL
      A0A1L1RPU6
      Related
      ENSGALP00010038645.1, ENSGALT00010062496.1

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      20421656..20424874 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015291002.4XP_015146488.1  transmembrane protein 53 isoform X1

      UniProtKB/TrEMBL
      A0A1L1RPU6
      Conserved Domains (1) summary
      pfam05705
      Location:1199
      DUF829; Eukaryotic protein of unknown function (DUF829)
    2. XM_015291003.4XP_015146489.1  transmembrane protein 53 isoform X1

      UniProtKB/TrEMBL
      A0A1L1RPU6
      Conserved Domains (1) summary
      pfam05705
      Location:1199
      DUF829; Eukaryotic protein of unknown function (DUF829)
    3. XM_046944492.1XP_046800448.1  transmembrane protein 53 isoform X1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      20428888..20432106 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)