SMYD5 SMYD family member 5 [Gallus gallus (chicken)] - Gene

Summary

Symbol: SMYD5provided by CGNC
Full Name: SMYD family member 5provided by CGNC
Primary source: CGNC:51866
See related: Ensembl:ENSGALG00010018231
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Annotation information: Annotation category: suggests misassembly
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 4

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	4	NC_052535.1 (89298470..89306717, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	4	NC_052576.1 (89101394..89109644, complement)

Chromosome 4 - NC_052535.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables histone H4K20 methyltransferase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: histone-lysine N-trimethyltransferase SMYD5

Names: SET and MYND domain-containing protein 5; [histone H4]-lysine20 N-trimethyltransferase SMYD5

NP_001012912.1

EC 2.1.1.372

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001012894.1 → NP_001012912.1 histone-lysine N-trimethyltransferase SMYD5

See identical proteins and their annotated locations for NP_001012912.1

Status: PROVISIONAL

Source sequence(s)

AJ720642

UniProtKB/Swiss-Prot

Q5ZIZ2

UniProtKB/TrEMBL

A0A8V0Z4Y7

Related

ENSGALP00010026181.1, ENSGALT00010044036.1

Conserved Domains (2) summary

smart00317
Location:300 → 357

SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain

pfam15371
Location:74 → 151

DUF4599; Domain of unknown function (DUF4599)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

89298470..89306717 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

89101394..89109644 complement

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GenBank, FASTA, Sequence Viewer (Graphics)