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    DEPDC7 DEP domain containing 7 [ Gallus gallus (chicken) ]

    Gene ID: 421593, updated on 17-Aug-2024

    Summary

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    Symbol
    DEPDC7provided by CGNC
    Full Name
    DEP domain containing 7provided by CGNC
    Primary source
    CGNC:8876
    See related
    Ensembl:ENSGALG00010020493
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See DEPDC7 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (6699869..6708185, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (6668113..6676411, complement)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene cleavage stimulation factor subunit 3 Neighboring gene t-complex 11 like 1 Neighboring gene uncharacterized LOC107053366 Neighboring gene peripheral-type benzodiazepine receptor-associated protein 1-like Neighboring gene peripheral-type benzodiazepine receptor-associated protein 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DEP domain-containing protein 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001199406.2 → NP_001186335.2  DEP domain-containing protein 7

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000214
      UniProtKB/TrEMBL
      A0A8V0ZKW7
      Related
      ENSGALP00010029265.1, ENSGALT00010049527.1
      Conserved Domains (2) summary
      cd04405
      Location:194 → 428
      RhoGAP_BRCC3-like; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of BRCC3-like proteins. This subgroup also contains two groups of closely related proteins, BRCC3 and DEPDC7, which both contain a C-terminal RhoGAP-like domain and an N-terminal ...
      cd04446
      Location:39 → 133
      DEP_DEPDC4; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC4-like proteins. DEPDC4 is a DEP domain containing protein of unknown function.

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      6699869..6708185 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046941538.1 → XP_046797494.1  DEP domain-containing protein 7 isoform X2

    2. XM_015286316.4 → XP_015141802.2  DEP domain-containing protein 7 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZEI2
      Related
      ENSGALP00010029263.1, ENSGALT00010049521.1
      Conserved Domains (2) summary
      cd04405
      Location:176 → 410
      RhoGAP_BRCC3-like; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of BRCC3-like proteins. This subgroup also contains two groups of closely related proteins, BRCC3 and DEPDC7, which both contain a C-terminal RhoGAP-like domain and an N-terminal ...
      cd04446
      Location:21 → 115
      DEP_DEPDC4; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC4-like proteins. DEPDC4 is a DEP domain containing protein of unknown function.

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      6668113..6676411 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046917981.1 → XP_046773937.1  DEP domain-containing protein 7 isoform X2

    2. XM_046917980.1 → XP_046773936.1  DEP domain-containing protein 7 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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    Research Materials