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    RNF138 ring finger protein 138 [ Gallus gallus (chicken) ]

    Gene ID: 421096, updated on 17-Aug-2024

    Summary

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    Symbol
    RNF138provided by CGNC
    Full Name
    ring finger protein 138provided by CGNC
    Primary source
    CGNC:11282
    See related
    Ensembl:ENSGALG00010004044
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See RNF138 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (106008328..106017823)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (106077538..106087035)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124417722 Neighboring gene uncharacterized LOC124417723 Neighboring gene uncharacterized LOC121109756 Neighboring gene meprin A subunit beta Neighboring gene uncharacterized LOC112531843 Neighboring gene GRB2 associated regulator of MAPK1 subtype 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RNF138
    Names
    ring finger protein 138, E3 ubiquitin protein ligase
    XP_015138089.1
    XP_015138091.1
    XP_040520016.1
    XP_040520018.1
    XP_040520019.1
    XP_040551613.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      106008328..106017823
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040695679.2 → XP_040551613.1  E3 ubiquitin-protein ligase RNF138 isoform X1

      UniProtKB/TrEMBL
      F1NC08
      Related
      ENSGALP00010005531.1, ENSGALT00010009358.1
      Conserved Domains (3) summary
      cd16544
      Location:13 → 58
      RING-HC_RNF138; RING finger, HC subclass, found in RING finger protein 138 (RNF138) and similar proteins
      pfam05605
      Location:157 → 216
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
      pfam18574
      Location:79 → 111
      zf_C2HC_14; C2HC Zing finger domain

    2. XM_015282605.4 → XP_015138091.1  E3 ubiquitin-protein ligase RNF138 isoform X3

      Conserved Domains (3) summary
      cd00162
      Location:17 → 56
      RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
      pfam18574
      Location:79 → 111
      zf_C2HC_14; C2HC Zing finger domain
      cl17238
      Location:13 → 58
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    3. XM_015282603.4 → XP_015138089.1  E3 ubiquitin-protein ligase RNF138 isoform X2

      Conserved Domains (3) summary
      cd16544
      Location:13 → 58
      RING-HC_RNF138; RING finger, HC subclass, found in RING finger protein 138 (RNF138) and similar proteins
      pfam05605
      Location:156 → 215
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
      pfam18574
      Location:79 → 111
      zf_C2HC_14; C2HC Zing finger domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      106077538..106087035
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040664082.2 → XP_040520016.1  E3 ubiquitin-protein ligase RNF138 isoform X1

      UniProtKB/TrEMBL
      F1NC08
      Conserved Domains (3) summary
      cd16544
      Location:13 → 58
      RING-HC_RNF138; RING finger, HC subclass, found in RING finger protein 138 (RNF138) and similar proteins
      pfam05605
      Location:157 → 216
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
      pfam18574
      Location:79 → 111
      zf_C2HC_14; C2HC Zing finger domain

    2. XM_040664085.2 → XP_040520019.1  E3 ubiquitin-protein ligase RNF138 isoform X3

      Conserved Domains (3) summary
      cd00162
      Location:17 → 56
      RING_Ubox; RING-HC finger (C3HC4-type) [structural motif]
      pfam18574
      Location:79 → 111
      zf_C2HC_14; C2HC Zing finger domain
      cl17238
      Location:13 → 58
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

    3. XM_040664084.2 → XP_040520018.1  E3 ubiquitin-protein ligase RNF138 isoform X2

      Conserved Domains (3) summary
      cd16544
      Location:13 → 58
      RING-HC_RNF138; RING finger, HC subclass, found in RING finger protein 138 (RNF138) and similar proteins
      pfam05605
      Location:156 → 215
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
      pfam18574
      Location:79 → 111
      zf_C2HC_14; C2HC Zing finger domain
    Nucleotide Protein Strain
    Heading Accession and Version

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