U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    SPNS3 sphingolipid transporter 3 (putative) [ Gallus gallus (chicken) ]

    Gene ID: 417493, updated on 10-Oct-2024

    Summary

    Go to the top of the page Help
    Symbol
    SPNS3provided by CGNC
    Full Name
    sphingolipid transporter 3 (putative)provided by CGNC
    Primary source
    CGNC:967
    See related
    Ensembl:ENSGALG00010029427
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SPNS3 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (3593594..3630640, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (3319305..3359297, complement)

    Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054785 Neighboring gene MYB binding protein 1a Neighboring gene microRNA 7444 Neighboring gene spinster homolog 2 Neighboring gene uncharacterized LOC121107290 Neighboring gene ubiquitin conjugating enzyme E2 G1 Neighboring gene ankyrin repeat and FYVE domain containing 1 Neighboring gene cytochrome b5 domain containing 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein spinster homolog 3
    Names
    spinster homolog 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      3593594..3630640 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046902552.1 → XP_046758508.1  protein spinster homolog 3 isoform X3

      UniProtKB/TrEMBL
      A0A8V1ANQ9

    2. XM_046902553.1 → XP_046758509.1  protein spinster homolog 3 isoform X3

      UniProtKB/TrEMBL
      A0A8V1ANQ9
      Related
      ENSGALP00010043884.1, ENSGALT00010071193.1

    3. XM_040650585.2 → XP_040506519.1  protein spinster homolog 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V1ACZ2, A0A8V1AK80
      Related
      ENSGALP00010043883.1, ENSGALT00010071192.1
      Conserved Domains (1) summary
      cd17328
      Location:51 → 470
      MFS_spinster_like; Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters

    4. XM_040650590.2 → XP_040506524.1  protein spinster homolog 3 isoform X3

      UniProtKB/TrEMBL
      A0A8V1ACZ2, A0A8V1ANQ9
      Related
      ENSGALP00010043885.1, ENSGALT00010071194.1
      Conserved Domains (1) summary
      cd17328
      Location:6 → 405
      MFS_spinster_like; Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters

    5. XM_040650592.2 → XP_040506526.1  protein spinster homolog 3 isoform X4

      Conserved Domains (1) summary
      cd17328
      Location:51 → 389
      MFS_spinster_like; Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters

    6. XM_040650593.2 → XP_040506527.1  protein spinster homolog 3 isoform X5

      Conserved Domains (1) summary
      cd17328
      Location:51 → 389
      MFS_spinster_like; Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters

    7. XM_040650588.2 → XP_040506522.1  protein spinster homolog 3 isoform X2

      Conserved Domains (1) summary
      cd17328
      Location:51 → 389
      MFS_spinster_like; Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      3319305..3359297 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046930205.1 → XP_046786161.1  protein spinster homolog 3 isoform X3

    2. XM_046930206.1 → XP_046786162.1  protein spinster homolog 3 isoform X3

    3. XM_040687054.2 → XP_040542988.1  protein spinster homolog 3 isoform X1

      UniProtKB/TrEMBL
      A0A8V1ACZ2
      Conserved Domains (1) summary
      cd17328
      Location:51 → 470
      MFS_spinster_like; Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters

    4. XM_040687059.2 → XP_040542993.1  protein spinster homolog 3 isoform X3

      UniProtKB/TrEMBL
      A0A8V1ACZ2
      Conserved Domains (1) summary
      cd17328
      Location:6 → 405
      MFS_spinster_like; Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters

    5. XM_040687058.2 → XP_040542992.1  protein spinster homolog 3 isoform X3

      UniProtKB/TrEMBL
      A0A8V1ACZ2
      Conserved Domains (1) summary
      cd17328
      Location:6 → 405
      MFS_spinster_like; Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters

    6. XM_040687057.2 → XP_040542991.1  protein spinster homolog 3 isoform X3

      UniProtKB/TrEMBL
      A0A8V1ACZ2
      Conserved Domains (1) summary
      cd17328
      Location:6 → 405
      MFS_spinster_like; Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters

    7. XM_040687060.2 → XP_040542994.1  protein spinster homolog 3 isoform X4

      Conserved Domains (1) summary
      cd17328
      Location:51 → 389
      MFS_spinster_like; Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters

    8. XM_040687061.2 → XP_040542995.1  protein spinster homolog 3 isoform X5

      Conserved Domains (1) summary
      cd17328
      Location:51 → 389
      MFS_spinster_like; Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters

    9. XM_040687056.2 → XP_040542990.1  protein spinster homolog 3 isoform X2

      Conserved Domains (1) summary
      cd17328
      Location:51 → 389
      MFS_spinster_like; Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters

    RNA

    1. XR_006936631.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials