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    nkain1 sodium/potassium transporting ATPase interacting 1 [ Danio rerio (zebrafish) ]

    Gene ID: 393517, updated on 12-Sep-2024

    Summary

    Official Symbol
    nkain1provided by ZNC
    Official Full Name
    sodium/potassium transporting ATPase interacting 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1472
    See related
    Ensembl:ENSDARG00000006859 AllianceGenome:ZFIN:ZDB-GENE-040426-1472
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:65908
    Summary
    Predicted to be involved in regulation of sodium ion transport. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human NKAIN1 (sodium/potassium transporting ATPase interacting 1). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See nkain1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (43017844..43031312)
    105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (43448407..43461875)

    Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene zinc finger, CCHC domain containing 17 Neighboring gene small nuclear ribonucleoprotein 40 (U5) Neighboring gene pumilio RNA-binding family member 1 Neighboring gene small nucleolar RNA SNORA5 Neighboring gene small nucleolar RNA SNORA5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Clone Names

    • MGC65908

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of sodium ion transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1
    Names
    Na(+)/K(+)-transporting ATPase subunit beta-1-interacting protein 1
    Na+/K+ transporting ATPase interacting 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200545.1NP_956839.1  sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1

      See identical proteins and their annotated locations for NP_956839.1

      Status: PROVISIONAL

      Source sequence(s)
      BC056509
      UniProtKB/Swiss-Prot
      Q6PHL4
      Related
      ENSDARP00000003013.6, ENSDART00000015632.9
      Conserved Domains (1) summary
      pfam05640
      Location:10206
      NKAIN; Na,K-Atpase Interacting protein

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007130.7 Reference GRCz11 Primary Assembly

      Range
      43017844..43031312
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)