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    NPIPA7 nuclear pore complex interacting protein family member A7 [ Homo sapiens (human) ]

    Gene ID: 101059938, updated on 28-Oct-2024

    Summary

    Official Symbol
    NPIPA7provided by HGNC
    Official Full Name
    nuclear pore complex interacting protein family member A7provided by HGNC
    Primary source
    HGNC:HGNC:41982
    See related
    Ensembl:ENSG00000214967 AllianceGenome:HGNC:41982
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    NPIPA8
    Expression
    Ubiquitous expression in skin (RPKM 37.5), ovary (RPKM 28.3) and 25 other tissues See more
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    Genomic context

    See NPIPA7 in Genome Data Viewer
    Location:
    16p13.11
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (16379140..16393972)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (16391364..16406190)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (16472997..16487829)

    Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene PKD1P1-NPIPA5L readthrough Neighboring gene polycystin 1, transient receptor potential channel interacting pseudogene 1 Neighboring gene nuclear pore complex interacting protein family, member A6 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:16455057-16455754 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:16462718-16463630 Neighboring gene polycystin 1, transient receptor potential channel interacting pseudogene 2 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:16464602-16465502 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:16468943-16469444 Neighboring gene microRNA 6511a-3 Neighboring gene phospholipase A2 group XF, pseudogene Neighboring gene uncharacterized LOC105371105

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    General protein information

    Preferred Names
    nuclear pore complex-interacting protein family member A7
    Names
    Nuclear pore complex-interacting protein family member A8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001282507.2NP_001269436.1  nuclear pore complex-interacting protein family member A7

      See identical proteins and their annotated locations for NP_001269436.1

      Status: VALIDATED

      Source sequence(s)
      AC136619, AC138969
      Consensus CDS
      CCDS61864.1
      UniProtKB/Swiss-Prot
      E9PJI5, P0DM63
      UniProtKB/TrEMBL
      A0A0J9YW05
      Related
      ENSP00000431814.2, ENST00000530217.3
      Conserved Domains (1) summary
      pfam06409
      Location:22221
      NPIP; Nuclear pore complex interacting protein (NPIP)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

      Range
      16379140..16393972
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187607.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      2040187..2055014
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060940.1 Alternate T2T-CHM13v2.0

      Range
      16391364..16406190
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)