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    tmem221 transmembrane protein 221 [ Danio rerio (zebrafish) ]

    Gene ID: 100537506, updated on 2-Nov-2024

    Summary

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    Official Symbol
    tmem221provided by ZNC
    Official Full Name
    transmembrane protein 221provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-120709-92
    See related
    Ensembl:ENSDARG00000086661 AllianceGenome:ZFIN:ZDB-GENE-120709-92
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:ch211-125m10.6
    Summary
    Predicted to be located in membrane. Orthologous to human TMEM221 (transmembrane protein 221). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See tmem221 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (18168910..18179162, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (18149082..18154249, complement)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110438300 Neighboring gene neurocan b Neighboring gene nuclear receptor 2C2-associated protein Neighboring gene regulatory factor X-associated ankyrin-containing protein Neighboring gene BLOC-1 related complex subunit 8 Neighboring gene myocyte enhancer factor 2b Neighboring gene transmembrane protein 161A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Evolution of complexity in the zebrafish synapse proteome. Bayés À, et al. Nat Commun, 2017 Mar 2. PMID 28252024, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein 221

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      18168910..18179162 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003201039.5 → XP_003201087.1  transmembrane protein 221

      UniProtKB/TrEMBL
      A0A8M1RTH2, E7EXZ1
      Related
      ENSDARP00000104781.1, ENSDART00000129576.3
      Conserved Domains (1) summary
      pfam15038
      Location:10 → 176
      Jiraiya; Jiraiya
    Nucleotide Protein Strain
    Heading Accession and Version

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