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    Tc00.1047053511903.110 40S ribosomal protein S8, putative [ Trypanosoma cruzi ]

    Gene ID: 3550064, updated on 23-Nov-2023

    Summary

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    Gene symbol
    Tc00.1047053511903.110
    Gene description
    40S ribosomal protein S8, putative
    Locus tag
    Tc00.1047053511903.110
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trypanosoma cruzi (strain: CL Brener)
    Lineage
    Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum
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    Genomic context

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    See Tc00.1047053511903.110 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_001849503.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene transketolase, putative Neighboring gene 60S ribosomal protein L26, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001849503.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020725
    2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    • heterozygous, non-Esmeraldo-like haplotype
      allele of Tc00.1047053511069.20

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    40S ribosomal protein S8, putative
    XP_817928.1
    • heterozygous, non-Esmeraldo-like haplotype
      allele of Tc00.1047053511069.20

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001849503.1 Reference assembly

      Range
      55779..56444
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_812835.1 → XP_817928.1  40S ribosomal protein S8, putative [Trypanosoma cruzi]

      See identical proteins and their annotated locations for XP_817928.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2V2VG33, A0A2V2WZJ4, Q4DU83
      Conserved Domains (1) summary
      PTZ00148
      Location:1 → 221
      PTZ00148; 40S ribosomal protein S8; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    7ASE_Z.1

    Gene LinkOut

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