A novel ATM mutation associated with elevated atypical lymphocyte populations, hyper-IgM, and cutaneous granulomas

Clin Immunol. 2019 Mar:200:55-63. doi: 10.1016/j.clim.2019.01.002. Epub 2019 Jan 9.

Abstract

Ataxia-Telangiectasia (AT) is an immunodeficiency most often associated with T cell abnormalities. We describe a patient with a hyper-IgM phenotype and immune cell abnormalities that suggest a distinct clinical phenotype. Significant B cell abnormalities with increased unswitched memory B cells, decreased naive transitional B cells, and an elevated frequency of CD19+CD38loCD27-CD10-CD21-/low B cells expressing high levels of T-bet and Fas were demonstrated. The B cells were hyporesponsive to in vitro stimulation through the B cell receptor, Toll like receptors (TLR) 7 and 9, and CD40. T cell homeostasis was also disturbed with a significant increase in γδ T cells, circulating T follicular helper cells (Tfh), and decreased numbers of T regulatory cells. The ATM mutations in this patient are posited to have resulted in the perturbations in the frequencies and distributions of B and T cell subsets, resulting in the phenotype in this patient. KEY MESSAGES: A novel mutation creating a premature stop codon and a nonsense mutation in the ATM gene are postulated to have resulted in the unique clinical picture characterized by abnormal B and T cell populations, lymphocyte subset dysfunction, granuloma formation, and a hyper-IgM phenotype. CAPSULE SUMMARY: A patient presented with ataxia-telangiectasia, cutaneous granulomas, and a hyper-IgM phenotype; a novel combination of mutations in the ATM gene was associated with abnormal distributions, frequencies, and function of T and B lymphocyte subsets.

Keywords: Ataxia-telangiectasia; CD38(lo)CD21(−/low) B cells; Fas; Hyper-IgM; T-bet; Tfh; Tregs; γδ T cells.

Publication types

  • Case Reports
  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Ataxia Telangiectasia / genetics*
  • Ataxia Telangiectasia / immunology
  • Ataxia Telangiectasia Mutated Proteins / genetics*
  • B-Lymphocyte Subsets / immunology*
  • B-Lymphocytes / immunology
  • Child, Preschool
  • Codon, Nonsense
  • Female
  • Granuloma / genetics*
  • Granuloma / immunology
  • High-Throughput Nucleotide Sequencing
  • Humans
  • Hyper-IgM Immunodeficiency Syndrome / genetics*
  • Hyper-IgM Immunodeficiency Syndrome / immunology
  • Immunologic Memory
  • Sequence Analysis, DNA
  • Skin Diseases / genetics*
  • Skin Diseases / immunology
  • T-Lymphocyte Subsets / immunology*
  • T-Lymphocytes / immunology

Substances

  • Codon, Nonsense
  • ATM protein, human
  • Ataxia Telangiectasia Mutated Proteins