Structural basis of bacterial transcription activation

Science. 2017 Nov 17;358(6365):947-951. doi: 10.1126/science.aao1923.

Abstract

In bacteria, the activation of gene transcription at many promoters is simple and only involves a single activator. The cyclic adenosine 3',5'-monophosphate receptor protein (CAP), a classic activator, is able to activate transcription independently through two different mechanisms. Understanding the class I mechanism requires an intact transcription activation complex (TAC) structure at a high resolution. Here we report a high-resolution cryo-electron microscopy structure of an intact Escherichia coli class I TAC containing a CAP dimer, a σ70-RNA polymerase (RNAP) holoenzyme, a complete class I CAP-dependent promoter DNA, and a de novo synthesized RNA oligonucleotide. The structure shows how CAP wraps the upstream DNA and how the interactions recruit RNAP. Our study provides a structural basis for understanding how activators activate transcription through the class I recruitment mechanism.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cryoelectron Microscopy
  • Cyclic AMP Receptor Protein / chemistry*
  • Cyclic AMP Receptor Protein / ultrastructure
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / ultrastructure
  • DNA-Directed RNA Polymerases / chemistry*
  • DNA-Directed RNA Polymerases / ultrastructure
  • Escherichia coli / genetics*
  • Escherichia coli Proteins / chemistry*
  • Escherichia coli Proteins / ultrastructure
  • Gene Expression Regulation, Bacterial*
  • Promoter Regions, Genetic
  • Sigma Factor / chemistry*
  • Sigma Factor / ultrastructure
  • Transcriptional Activation*

Substances

  • Cyclic AMP Receptor Protein
  • DNA, Bacterial
  • Escherichia coli Proteins
  • Sigma Factor
  • crp protein, E coli
  • RNA polymerase sigma 70
  • DNA-Directed RNA Polymerases